RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TMEM167AQ8TBQ9 72 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 GPX8Q8TED1 209 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 SECTM1Q8WVN6 248 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 SRSF12Q8WXF0 261 aaKnown RBP4.38□□□□□ -1.71
SUDS3-202ENST00000541280 SNAPC3Q92966 411 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 MS4A10Q96PG2 267 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 FAM103A1Q9BTL3 118 aaKnown RBP4.38□□□□□ -1.71
SUDS3-202ENST00000541280 GNB4Q9HAV0 340 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 BET1LQ9NYM9 111 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 THYN1Q9P016 225 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 COMMD3Q9UBI1 195 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
SUDS3-202ENST00000541280 ANAPC10Q9UM13 185 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF257Q9Y2Q1 563 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 FBXO7Q9Y3I1 522 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 A3GALT2U3KPV4 340 aa4.38□□□□□ -1.71
SUDS3-202ENST00000541280 TRBV9A0A0B4J1U6 114 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 IGKV1D-13A0A0B4J2D9 117 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 FAM25AB3EWG3 89 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 FAM25CB3EWG5 89 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 FAM25GB3EWG6 89 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 H0Y980 276 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 J3QRK9 145 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 B3GALNT1O75752 331 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 KBTBD11O94819 623 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 IFNA6P05013 189 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 CRYGCP07315 174 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 SAA1P0DJI8 122 aaPredicted RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 IGKV1-13P0DP09 117 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 GNRHRP30968 328 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 RCVRNP35243 200 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 TMBIM6P55061 237 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 ERVK-16P61578 105 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 VBP1P61758 197 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 RPL30P62888 115 aaKnown RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 RPL8P62917 257 aaKnown RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 MRPS10P82664 201 aaKnown RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 SSBP1Q04837 148 aaKnown RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 PJVKQ0ZLH3 352 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 CTF1Q16619 201 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 DEFB136Q30KP8 78 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 AADACL3Q5VUY0 350 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 GPR107Q5VW38 600 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF343Q6P1L6 599 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 SPAG16Q8N0X2 631 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 PUSL1Q8N0Z8 303 aaKnown RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 ADAD2Q8NCV1 583 aaKnown RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 OR1L6Q8NGR2 347 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 RAB2BQ8WUD1 216 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 DCUN1D4Q92564 292 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 DLX4Q92988 240 aaPredicted RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 MOB3AQ96BX8 217 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 C5orf30Q96GV9 206 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 DUX3Q96PT4 197 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 TSC22D3Q99576 134 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF2Q9BSG1 426 aaPredicted RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 COMMD5Q9GZQ3 224 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF430Q9H8G1 570 aaPredicted RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 CCL28Q9NRJ3 127 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 SLC2A9Q9NRM0 540 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 COA4Q9NYJ1 87 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 FKBP11Q9NYL4 201 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 TAS2R8Q9NYW2 309 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 SIGLEC8Q9NYZ4 499 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 EHFQ9NZC4 300 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 COMMD9Q9P000 198 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 PEMTQ9UBM1 199 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF256Q9Y2P7 627 aaPredicted RBP4.37□□□□□ -1.71
SUDS3-202ENST00000541280 MGAM2Q2M2H8 2515 aa4.37□□□□□ -1.71
SUDS3-202ENST00000541280 TRBV7-1A0A0A6YYK4 115 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 GPR31O00270 319 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 NOL3O60936 208 aaKnown RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 SAP30O75446 220 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 PGLYRP1O75594 196 aaPredicted RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 SNAPC5O75971 98 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ATG12O94817 140 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 PMP2P02689 132 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 PRB2P02812 416 aaPredicted RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF735P0CB33 412 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 DEFA4P12838 97 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 RPA2P15927 270 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 HLA-GP17693 338 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 F2RP25116 425 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 PTBP1P26599 531 aaKnown RBP eCLIP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 RPL27AP46776 148 aaKnown RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ALDH3B2P48448 385 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 FXYD4P59646 89 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 NCS1P62166 190 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 RPEL1Q2QD12 228 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 VAX1Q5SQQ9 334 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ZNF818PQ6ZRF7 136 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 SLC38A6Q8IZM9 456 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 ARRDC1Q8N5I2 433 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 DMBX1Q8NFW5 382 aa4.36□□□□□ -1.71
SUDS3-202ENST00000541280 OR2K2Q8NGT1 345 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms