RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 FRMD6-AS1P0C7T7 363 aa10.25□□□□□ -0.77
RNF4-222ENST00000541204 CFHR2P36980 270 aa10.25□□□□□ -0.77
RNF4-222ENST00000541204 OR4P4Q8NGL7 312 aa10.25□□□□□ -0.77
RNF4-222ENST00000541204 SPTBN4Q9H254 2564 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 POLEQ07864 2286 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 C15orf61A6NNL5 157 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 ACTL6BO94805 426 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 NPY1RP25929 384 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 OR10J1P30954 320 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 RHOBP62745 196 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 SLC24A4Q8NFF2 622 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 DDB2Q92466 427 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 TBX15Q96SF7 602 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 HINT2Q9BX68 163 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 MRPL18Q9H0U6 180 aaKnown RBP10.24□□□□□ -0.77
RNF4-222ENST00000541204 IL36BQ9NZH7 164 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 IL19Q9UHD0 177 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 TRGV8A0A0C4DH27 118 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 MMP23AO75900 390 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 CA2P00918 260 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 THBDP07204 575 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 IGFBP2P18065 325 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 TNFSF4P23510 183 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 LINC00310P59036 64 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 OR5I1Q13606 314 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 C17orf58Q2M2W7 97 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 ZCCHC14Q8WYQ9 949 aaKnown RBP10.24□□□□□ -0.77
RNF4-222ENST00000541204 FAM122AQ96E09 287 aa10.24□□□□□ -0.77
RNF4-222ENST00000541204 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
RNF4-222ENST00000541204 F2RL2O00254 374 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 IRF2P14316 349 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 SELENOTP62341 195 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 Q6ZWC4 215 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 LYG1Q8N1E2 194 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 OR4S2Q8NH73 311 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 TPRP12270 2363 aaKnown RBP10.23□□□□□ -0.77
RNF4-222ENST00000541204 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 SERF1AO75920 110 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 SAA2P0DJI9 122 aaPredicted RBP10.23□□□□□ -0.77
RNF4-222ENST00000541204 CRISP2P16562 243 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 ADIPOQQ15848 244 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 CR1LQ2VPA4 569 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 OR1L6Q8NGR2 347 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 NEU1Q99519 415 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 TMEM106BQ9NUM4 274 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 LRBAP50851 2863 aa10.23□□□□□ -0.77
RNF4-222ENST00000541204 TRGV10A0A0A0MS01 117 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 F2Z2F3 143 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 FCN1O00602 326 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 IER3P46695 156 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 STUMQ69YW2 141 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 CCL17Q92583 94 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 NEUROG1Q92886 237 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
RNF4-222ENST00000541204 CHODLQ9H9P2 273 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 MT-CO2P00403 227 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 KIR2DS2P43631 304 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 GATA4P43694 442 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 RPL29P47914 159 aaKnown RBP10.22□□□□□ -0.77
RNF4-222ENST00000541204 LGALS4P56470 323 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 HSPE1P61604 102 aaKnown RBP10.22□□□□□ -0.77
RNF4-222ENST00000541204 TOMM20LQ6UXN7 152 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 MOB3BQ86TA1 216 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 UHRF2Q96PU4 802 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 ENY2Q9NPA8 101 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 TMEM14BQ9NUH8 114 aa10.22□□□□□ -0.77
RNF4-222ENST00000541204 YLPM1P49750 1951 aaKnown RBP10.22□□□□□ -0.77
RNF4-222ENST00000541204 KBTBD11-OT1A0A1B0GTJ5 212 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 M0R143 59 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 SPINK4O60575 86 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 TPPP2P59282 170 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 RAB31Q13636 194 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 PSG5Q15238 335 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 ZNF124Q15973 351 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 MMD2Q8IY49 270 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 FAM216AQ8WUB2 273 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 C11orf52Q96A22 123 aa10.21□□□□□ -0.77
RNF4-222ENST00000541204 FOXA2Q9Y261 457 aaPredicted RBP10.21□□□□□ -0.77
RNF4-222ENST00000541204 SNURFLB1AK76 121 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 C9JCJ5 164 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 CDKN1AP38936 164 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 PRR20EP86478 221 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 PRR20CP86479 221 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 PRR20DP86480 221 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 PRR20BP86481 221 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 PRR20AP86496 221 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 RPEL1Q2QD12 228 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 C3orf36Q3SXR2 165 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 OR8I2Q8N0Y5 310 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 HSPB9Q9BQS6 159 aa10.21□□□□□ -0.78
RNF4-222ENST00000541204 IDI2-AS1Q9NZ38 188 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms