RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 ZNF441Q8N8Z8 693 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 HILPDAQ9Y5L2 63 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 UBE2V1Q13404 147 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 TRIP6Q15654 476 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 SEC16AO15027 2179 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 TSKUQ8WUA8 353 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 SCGB3A1Q96QR1 104 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 A0A087WV48 116 aa12.59□□□□□ -0.39
SMARCA4-207ENST00000541122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 UMODP07911 640 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 TDGF1P3P51864 188 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 FADS6Q8N9I5 356 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 CHCHD2Q9Y6H1 151 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 PPBPP02775 128 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 REG1AP05451 166 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 NUDT10Q8NFP7 164 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 DNAL4O96015 105 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 GPX1P07203 203 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 TSPOP30536 169 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 WDR82Q6UXN9 313 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 SMRP1Q8NCR6 262 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 Q9H3A6 140 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 A0A0G2JMZ2 1700 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 LRRC37A2A6NM11 1700 aa12.58□□□□□ -0.4
SMARCA4-207ENST00000541122 HTN1P15515 57 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 UNQ5815/PRO19632Q6UWF5 114 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 LINC01551Q86U37 167 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 TEX29Q8N6K0 151 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 SSBP4Q9BWG4 385 aaPredicted RBP12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 CLEC7AQ9BXN2 247 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 C15orf61A6NNL5 157 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 SFTPCP11686 197 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 LYZL4Q96KX0 146 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 NHP2Q9NX24 153 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 GZMBP10144 247 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 OR13A1Q8NGR1 328 aa12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 NXT2Q9NPJ8 142 aaKnown RBP12.57□□□□□ -0.4
SMARCA4-207ENST00000541122 COL11A2P13942 1736 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 PATJQ8NI35 1801 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 IGKV1D-8A0A087WSZ0 117 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 RIPPLY3P57055 190 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 LPAR2Q9HBW0 351 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 EPDR1Q9UM22 224 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 IGHV1-69-2A0A0G2JMI3 117 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 FAM181BA6NEQ2 426 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 FOXI3A8MTJ6 420 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 A8MWP6 167 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 DPM2O94777 84 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 KLRB1Q12918 225 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 Q5PR19 223 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 BEX4Q9NWD9 120 aaPredicted RBP12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNHIT1O43257 154 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNF497Q6ZNH5 498 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 ANAPC13Q9BS18 74 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 MRPL27Q9P0M9 148 aaKnown RBP12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 YPEL1O60688 119 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 EFNB3Q15768 340 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
SMARCA4-207ENST00000541122 KBTBD11-OT1A0A1B0GTJ5 212 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 NPPCP23582 126 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 CFPP27918 469 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 ERVK11-1P61568 191 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 IGLV3-32A0A0A0MS00 114 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 UPK2O00526 184 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 TYMSP04818 313 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 SLC25A45Q8N413 288 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 C20orf144Q9BQM9 153 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 NMSQ5H8A3 153 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
SMARCA4-207ENST00000541122 PEAR1Q5VY43 1037 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 Q6ZT83 130 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 H7C1H1 209 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 UBE2L6O14933 153 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 IGHV2-70P01814 119 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 MRPS18CQ9Y3D5 142 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 MAP1BP46821 2468 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 IQCF6A8MYZ5 107 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 LEPP41159 167 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 ASIPP42127 132 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 PMS2CLQ68D20 193 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 DEFB124Q8NES8 71 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 DYNLRB2Q8TF09 96 aa12.54□□□□□ -0.4
SMARCA4-207ENST00000541122 ZNF479Q96JC4 524 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms