RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 PXMP4Q9Y6I8 212 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 SMCO3A2RU48 225 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 COL8A2P25067 703 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 DIAPH2-AS1Q14236 149 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 C1QL4Q86Z23 238 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 OR10X1Q8NGY0 326 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 TMEM167AQ8TBQ9 72 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
RTN3-210ENST00000540798 ROS1P08922 2347 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 ZNF727A8MUV8 499 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 DEFA4P12838 97 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 TMEM11P17152 192 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 OR1L8Q8NGR8 309 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 GFI1BQ5VTD9 330 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 TEPPQ6URK8 271 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 OR4C13Q8NGP0 309 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 TNFRSF14Q92956 283 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 FLYWCH2Q96CP2 140 aaKnown RBP11.17□□□□□ -0.62
RTN3-210ENST00000540798 NEIL1Q96FI4 390 aaPredicted RBP11.17□□□□□ -0.62
RTN3-210ENST00000540798 TMEM133Q9H2Q1 129 aa11.17□□□□□ -0.62
RTN3-210ENST00000540798 RALYQ9UKM9 306 aaKnown RBP11.17□□□□□ -0.62
RTN3-210ENST00000540798 RPL29P47914 159 aaKnown RBP11.16□□□□□ -0.62
RTN3-210ENST00000540798 ELOBQ15370 118 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 MIC13Q5XKP0 118 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 CYP2G1PQ6ZSU1 146 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 PKDREJQ9NTG1 2253 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 A6NNC1 897 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 RBP4P02753 201 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 RNASE2P10153 161 aaKnown RBP11.16□□□□□ -0.62
RTN3-210ENST00000540798 HIST1H1BP16401 226 aaKnown RBP11.16□□□□□ -0.62
RTN3-210ENST00000540798 USF1P22415 310 aaPredicted RBP11.16□□□□□ -0.62
RTN3-210ENST00000540798 PRR20EP86478 221 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 PRR20CP86479 221 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 PRR20DP86480 221 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 PRR20BP86481 221 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 PRR20AP86496 221 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 CLEC2AQ6UVW9 174 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 C8orf46Q8TAG6 207 aa11.16□□□□□ -0.62
RTN3-210ENST00000540798 REG1BP48304 166 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 RND2P52198 227 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 NDUFA6P56556 154 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 SPNS3Q6ZMD2 512 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 NAT8Q9UHE5 227 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 ZZEF1O43149 2961 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 LYNX1G3V0Z9 82 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 LYNX1P0DP58 116 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
RTN3-210ENST00000540798 CGB1A6NKQ9 187 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 PAGE4O60829 102 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 IGLV1-47P01700 117 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 S100A2P29034 98 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 RPL8P62917 257 aaKnown RBP11.15□□□□□ -0.63
RTN3-210ENST00000540798 C11orf71Q6IPW1 123 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 Q8WTZ3 238 aa11.15□□□□□ -0.63
RTN3-210ENST00000540798 MC5RP33032 325 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 STPG3Q8N7X2 389 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 PRORYQ9H606 182 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 PATZ1Q9HBE1 687 aaKnown RBP11.14□□□□□ -0.63
RTN3-210ENST00000540798 EPG5Q9HCE0 2579 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 LINC00869P0C866 280 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 TMEM144Q7Z5S9 345 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 HINT2Q9BX68 163 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 PARLQ9H300 379 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 SLC45A2Q9UMX9 530 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 TNCP24821 2201 aa11.14□□□□□ -0.63
RTN3-210ENST00000540798 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 OR4F4Q96R69 305 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 CTDSP1Q9GZU7 261 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 IGHV2-26A0A0B4J1V2 119 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 E7EUB6 86 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 TSTD3H0UI37 97 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 PHOX2AO14813 284 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 OPN1MWP04001 364 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 CXCL1P09341 107 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 IGFBP2P18065 325 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 NPPCP23582 126 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 IL3RAP26951 378 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 ZNF343Q6P1L6 599 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 OR10W1Q8NGF6 305 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 SSMEM1Q8WWF3 244 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 CXorf1O96002 111 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 RAB31Q13636 194 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 LY6G5BQ8NDX9 201 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 BEND2Q8NDZ0 799 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 ABHD5Q8WTS1 349 aa11.13□□□□□ -0.63
RTN3-210ENST00000540798 GPR61Q9BZJ8 451 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms