RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 INMT-MINDY4F8WBC2 141 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 OR2J3O76001 311 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 IL5P05113 134 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 AARDQ4LEZ3 155 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 SLC25A24Q6NUK1 477 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 FAM223AQ8IWN6 122 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 OR1L6Q8NGR2 347 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 OR1S1Q8NH92 325 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 ZNF431Q8TF32 576 aaPredicted RBP12.03□□□□□ -0.48
DDB1-218ENST00000540784 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 PALMDQ9NP74 551 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 FBXL7Q9UJT9 491 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 CCL24O00175 119 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 SLC25A6P12236 298 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 SNCAP37840 140 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 MYCNOSP40205 109 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 RUNX1Q01196 453 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 KLK9Q2XQG4 91 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 OR2C3Q8N628 320 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 UXS1Q8NBZ7 420 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 OR1N2Q8NGR9 330 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 FANCD2OSQ96PS1 177 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 GPN1Q9HCN4 374 aaPredicted RBP12.02□□□□□ -0.49
DDB1-218ENST00000540784 THYN1Q9P016 225 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.49
DDB1-218ENST00000540784 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
DDB1-218ENST00000540784 DNHD1Q96M86 4753 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 CEBPZOSA8MTT3 80 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 INS-IGF2F8WCM5 200 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 I3L521 148 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 ADAP1O75689 374 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 NDUFB8O95169 186 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 PF4P02776 101 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 LGALS1P09382 135 aaKnown RBP12.01□□□□□ -0.49
DDB1-218ENST00000540784 HOXA1P49639 335 aaPredicted RBP12.01□□□□□ -0.49
DDB1-218ENST00000540784 PDLIM3Q53GG5 364 aaPredicted RBP12.01□□□□□ -0.49
DDB1-218ENST00000540784 C12orf45Q8N5I9 185 aaPredicted RBP12.01□□□□□ -0.49
DDB1-218ENST00000540784 DPF1Q92782 380 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 RAX2Q96IS3 184 aa12.01□□□□□ -0.49
DDB1-218ENST00000540784 IGLV11-55A0A075B6I3 123 aa12□□□□□ -0.49
DDB1-218ENST00000540784 PITX3O75364 302 aa12□□□□□ -0.49
DDB1-218ENST00000540784 NXPH3O95157 252 aa12□□□□□ -0.49
DDB1-218ENST00000540784 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
DDB1-218ENST00000540784 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
DDB1-218ENST00000540784 DEFA5Q01523 94 aa12□□□□□ -0.49
DDB1-218ENST00000540784 TNFRSF9Q07011 255 aa12□□□□□ -0.49
DDB1-218ENST00000540784 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
DDB1-218ENST00000540784 DEFB136Q30KP8 78 aa12□□□□□ -0.49
DDB1-218ENST00000540784 C15orf32Q32M92 178 aa12□□□□□ -0.49
DDB1-218ENST00000540784 ZNF343Q6P1L6 599 aa12□□□□□ -0.49
DDB1-218ENST00000540784 TREML4Q6UXN2 200 aa12□□□□□ -0.49
DDB1-218ENST00000540784 OR11H1Q8NG94 326 aa12□□□□□ -0.49
DDB1-218ENST00000540784 OR1P1Q8NH06 330 aa12□□□□□ -0.49
DDB1-218ENST00000540784 DUX3Q96PT4 197 aa12□□□□□ -0.49
DDB1-218ENST00000540784 P2RX4Q99571 388 aa12□□□□□ -0.49
DDB1-218ENST00000540784 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
DDB1-218ENST00000540784 HEYLQ9NQ87 328 aaPredicted RBP12□□□□□ -0.49
DDB1-218ENST00000540784 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
DDB1-218ENST00000540784 ANKRD34BA5PLL1 514 aa11.99□□□□□ -0.49
DDB1-218ENST00000540784 PRAF2O60831 178 aa11.99□□□□□ -0.49
DDB1-218ENST00000540784 PTTG1O95997 202 aa11.99□□□□□ -0.49
DDB1-218ENST00000540784 SPNP16150 400 aa11.99□□□□□ -0.49
DDB1-218ENST00000540784 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
DDB1-218ENST00000540784 RANGRFQ9HD47 186 aaPredicted RBP11.99□□□□□ -0.49
DDB1-218ENST00000540784 PEF1Q9UBV8 284 aaKnown RBP11.99□□□□□ -0.49
DDB1-218ENST00000540784 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
DDB1-218ENST00000540784 SNRPGP15A8MWD9 76 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 FAM90A26D6RGX4 464 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 MED6O75586 246 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 MFAP2P55001 183 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 ZNF616Q08AN1 781 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 EXOSC2Q13868 293 aaKnown RBP11.98□□□□□ -0.49
DDB1-218ENST00000540784 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 RBKSQ9H477 322 aa11.98□□□□□ -0.49
DDB1-218ENST00000540784 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 LINC01619G3V211 115 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 HTR2BP41595 481 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 VN1R17PQ8TDU5 208 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 MISP3Q96FF7 219 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 GSKIPQ9P0R6 139 aa11.97□□□□□ -0.49
DDB1-218ENST00000540784 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 A0A087WW49 117 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.96□□□□□ -0.49
DDB1-218ENST00000540784 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 C5orf51A6NDU8 294 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 FAM25EA8MYX2 175 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 IGHV3-23P01764 117 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 OR8U8P0C7N1 319 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.49
DDB1-218ENST00000540784 CD33P20138 364 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 RGS21Q2M5E4 152 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms