RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 UBQLN2Q9UHD9 624 aa5.43□□□□□ -1.54
YBX3-209ENST00000540747 ELF5Q9UKW6 265 aaPredicted RBP5.43□□□□□ -1.54
YBX3-209ENST00000540747 RAB22AQ9UL26 194 aa5.43□□□□□ -1.54
YBX3-209ENST00000540747 KCNK7Q9Y2U2 307 aa5.43□□□□□ -1.54
YBX3-209ENST00000540747 LOC102724200A0A096LPH7 203 aaPredicted RBP5.42□□□□□ -1.54
YBX3-209ENST00000540747 TMEM272A0A1B0GTI8 110 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 LINC00862A6NCI5 91 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 NPIPB5A8MRT5 1133 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 DISC1C4P0D8 188 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 L7N2F9 121 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 SHOXO15266 292 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 GGCTO75223 188 aaKnown RBP5.42□□□□□ -1.54
YBX3-209ENST00000540747 OR2J3O76001 311 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 NDUFB8O95169 186 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 OR2C1O95371 312 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 RAB3DO95716 219 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 CRYZL1O95825 349 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 SAA1P0DJI8 122 aaPredicted RBP5.42□□□□□ -1.54
YBX3-209ENST00000540747 PTHLHP12272 177 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 ANXA7P20073 488 aaKnown RBP5.42□□□□□ -1.54
YBX3-209ENST00000540747 TAS2R19P59542 299 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 OPCMLQ14982 345 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 TNXAQ16473 311 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 RTL8BQ17RB0 113 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 VMA21Q3ZAQ7 101 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 IGSF11Q5DX21 431 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 STEAP1BQ6NZ63 245 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 TEX261Q6UWH6 196 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 C19orf35Q6ZS72 473 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 UXS1Q8NBZ7 420 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 OR11H4Q8NGC9 324 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 OSR1Q8TAX0 266 aaPredicted RBP5.42□□□□□ -1.54
YBX3-209ENST00000540747 PHB2Q99623 299 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 SPIN2AQ99865 258 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 SPIN2BQ9BPZ2 258 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 ZNF257Q9Y2Q1 563 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 U3KQ87 197 aa5.42□□□□□ -1.54
YBX3-209ENST00000540747 TRAV25A0A0B4J276 109 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 E7EUB6 86 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 SCGNO76038 276 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 CRYGCP07315 174 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 FCGR3AP08637 254 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 IL6RP08887 468 aaPredicted RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 RAB6AP20340 208 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 NFYAP23511 347 aaPredicted RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 BMI1P35226 326 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 PLA2G7Q13093 441 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 MEF2DQ14814 521 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 C4orf46Q504U0 113 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 Q6ZS49 121 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 MMD2Q8IY49 270 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 H1FOOQ8IZA3 346 aaPredicted RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 C12orf45Q8N5I9 185 aaPredicted RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 OR51S1Q8NGJ8 323 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 OR52B4Q8NGK2 314 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 OR4C16Q8NGL9 310 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 GPX8Q8TED1 209 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 GATAD1Q8WUU5 269 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 RNF183Q96D59 192 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 ADTRPQ96IZ2 230 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 CMSS1Q9BQ75 279 aaKnown RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 SLC25A21Q9BQT8 299 aaPredicted RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 URM1Q9BTM9 101 aaKnown RBP5.41□□□□□ -1.54
YBX3-209ENST00000540747 SELENOKQ9Y6D0 94 aa5.41□□□□□ -1.54
YBX3-209ENST00000540747 HSPG2P98160 4391 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 KIR2DL5BA0A0G2JN68 375 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 KIR2DL5BA0A0G2JPC4 375 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 MEIS3P1A6NDR6 274 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 CGB1A6NKQ9 187 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 MFNGO00587 321 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 UBE2CO00762 179 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 GOSR2O14653 212 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 BET1O15155 118 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 MPPED1O15442 326 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 SPRY2O43597 315 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 SCAF4O95104 1147 aaKnown RBP5.4□□□□□ -1.54
YBX3-209ENST00000540747 S1PR2O95136 353 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 IGLV2-14P01704 120 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 CD3DP04234 171 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 ZNF735P0CB33 412 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 PSMB6P28072 239 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 ARL3P36405 182 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 BRWD1-AS2P59051 145 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 PRR20EP86478 221 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 PRR20CP86479 221 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 PRR20DP86480 221 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 PRR20BP86481 221 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 PRR20AP86496 221 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 DHODHQ02127 395 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 EIF4EBP1Q13541 118 aaPredicted RBP5.4□□□□□ -1.54
YBX3-209ENST00000540747 DEFB135Q30KP9 77 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 ODF3L2Q3SX64 289 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 CDNFQ49AH0 187 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 CLLU1Q5K131 121 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 FAAP20Q6NZ36 180 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 BTNL8Q6UX41 500 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 UNQ9165/PRO28630Q6UXU0 137 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 SLC25A42Q86VD7 318 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms