RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SLX4Q8IY92 1834 aa0.73□□□□□ -2.29
MDM2-227ENST00000540709 NUP160Q12769 1436 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FLT4P35916 1363 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 hCG_1818297A0A087WSY0 165 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 TMSB15BA0A087X1C1 80 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 TRAV38-1A0A0B4J264 116 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 TRAV26-2A0A0B4J265 109 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 A0A0J9YW62 118 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FAM236DA0A1B0GTK5 79 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 hADV38S2A0JD32 116 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 PQLC2LA1A4F0 135 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 A8MT66 165 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FABP5P3A8MUU1 101 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 LEPROTO15243 131 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SLC22A1O15245 554 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FADS1O60427 444 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 OR7C1O76099 320 aaPredicted RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 NPYP01303 97 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 TTRP02766 147 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 PPBPP02775 128 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SERPINE1P05121 402 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 ZNF728P0DKX0 622 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SMIM17P0DL12 118 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SULT1A3P0DMM9 295 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SULT1A4P0DMN0 295 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FAM236CP0DP71 79 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 DEFA4P12838 97 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H1TP22492 207 aaPredicted RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BOP23527 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 CD24P25063 80 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 S100A4P26447 101 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 G0S2P27469 103 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BBP33778 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 PPP1R2P41236 205 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 RPL28P46779 137 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 CAPZBP47756 277 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BDP58876 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 RPS20P60866 119 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 RHOBP62745 196 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BCP62807 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FKBP1AP62942 108 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 CTAG1AP78358 180 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 TNFAIP6P98066 277 aaPredicted RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 RPL18Q07020 188 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 SLC38A11Q08AI6 406 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 MIAQ16674 131 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST2H2BEQ16778 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 LGALS9BQ3B8N2 356 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 ARHGAP11BQ3KRB8 267 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 LIN52Q52LA3 116 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 TMEM42Q69YG0 159 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 PPP1R2P3Q6NXS1 205 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 Q6ZS49 121 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 WFDC11Q8NEX6 87 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 OR51A2Q8NGJ7 313 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 CLDND2Q8NHS1 167 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SMCR5Q8TEV8 140 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 CT55Q8WUE5 264 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SLC7A6Q92536 515 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BHQ93079 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 PRAP1Q96NZ9 151 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BNQ99877 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 HIST1H2BMQ99879 126 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 CISHQ9NSE2 258 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 FBXL12Q9NXK8 326 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 IL36BQ9NZH7 164 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 MRPL27Q9P0M9 148 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 RSL24D1Q9UHA3 163 aaKnown RBP0.72□□□□□ -2.29
MDM2-227ENST00000540709 HHLA3Q9XRX5 114 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 TIMM22Q9Y584 194 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 ARHGAP32A7KAX9 2087 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 SNAPC4Q5SXM2 1469 aa0.72□□□□□ -2.29
MDM2-227ENST00000540709 CCDC88CQ9P219 2028 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 IGKV3-7A0A075B6H7 116 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 IRGMA1A4Y4 181 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 DPRXA6NFQ7 191 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 ZNF705FA8MVS1 300 aaPredicted RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 C1orf196B1AJZ1 125 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 CLDN25C9JDP6 229 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 H7C2G1 150 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 HMGB3O15347 200 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 ORC5O43913 435 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 CST8O60676 142 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 LGALS1P09382 135 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 RPS4Y1P22090 263 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 PSMB8P28062 276 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 CASP1P29466 404 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 ERP29P30040 261 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 HOXA6P31267 233 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 S100A5P33763 92 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 TPI1P60174 286 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 RAB14P61106 215 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 VBP1P61758 197 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 HIST1H4AP62805 103 aaKnown RBP0.71□□□□□ -2.3
MDM2-227ENST00000540709 HIST1H3AP68431 136 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 CCL20P78556 96 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 H3F3AP84243 136 aa0.71□□□□□ -2.3
MDM2-227ENST00000540709 PRB3Q04118 309 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms