RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 AARDQ4LEZ3 155 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 NMSQ5H8A3 153 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 CTRB2Q6GPI1 263 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 Q6ZRM9 215 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 HSD17B13Q7Z5P4 300 aaPredicted RBP5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 LGI3Q8N145 548 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 LRTM2Q8N967 370 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 OR10W1Q8NGF6 305 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 RNASE11Q8TAA1 199 aaKnown RBP5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 RRNAD1Q96FB5 475 aaKnown RBP5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 RAX2Q96IS3 184 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 ZNF355PQ9NSJ1 428 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 NUDT15Q9NV35 164 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 FKBP11Q9NYL4 201 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 SHPKQ9UHJ6 478 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 KLK9Q9UKQ9 250 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
LPCAT3-209ENST00000540060 IGLV11-55A0A075B6I3 123 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 FAM240BA0A1B0GVZ2 78 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 DUXBA0A1W2PPF3 345 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 C9orf170A2RU37 121 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 FAM223BA6NKX1 122 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 ST8SIA3O43173 380 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 IGHV3-11P01762 117 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 PF4P02776 101 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 OR13C7P0DN81 318 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 MECP2P51608 486 aaKnown RBP5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 HSPE1P61604 102 aaKnown RBP5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 RHOGP84095 191 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 DHRS2Q13268 280 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 MZT2BQ6NZ67 158 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 LYG2Q86SG7 212 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 FAM223AQ8IWN6 122 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 ZNF114Q8NC26 417 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 NECAP1Q8NC96 275 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 GPR146Q96CH1 333 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 FANCD2OSQ96PS1 177 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 DUX3Q96PT4 197 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 OR5B12Q96R08 314 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 P2RX4Q99571 388 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 HINT2Q9BX68 163 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 ALX4Q9H161 411 aaPredicted RBP5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 CACNG5Q9UF02 275 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 DMRT1Q9Y5R6 373 aa5.4□□□□□ -1.54
LPCAT3-209ENST00000540060 TRAV6A0A075B6T7 132 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 PIGBOS1A0A0B4J2F0 54 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 A0A0G2JLM5 398 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 C13orf42A0A1B0GVH6 325 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 INS-IGF2F8WCM5 200 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 CCL24O00175 119 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 OR2J3O76001 311 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 DUS4LO95620 317 aaKnown RBP5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 DHFRP00374 187 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 SULT1A3P0DMM9 295 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 SULT1A4P0DMN0 295 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 MFAP2P55001 183 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 EXOSC2Q13868 293 aaKnown RBP5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 C4orf46Q504U0 113 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 PDLIM3Q53GG5 364 aaPredicted RBP5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 SPINK9Q5DT21 86 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 NRARPQ7Z6K4 114 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 MRPL41Q8IXM3 137 aaKnown RBP5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 OR2C3Q8N628 320 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 LINC00482Q8N8I6 264 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 OR11H1Q8NG94 326 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 OR52B4Q8NGK2 314 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 ENKURQ8TC29 256 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 USMG5Q96IX5 58 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 PDCD10Q9BUL8 212 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 PLEKHA3Q9HB20 300 aa5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 F11RQ9Y624 299 aaKnown RBP5.39□□□□□ -1.55
LPCAT3-209ENST00000540060 DNAH3Q8TD57 4116 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 IGHV4OR15-8A0A075B7B6 117 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 A0A087WW49 117 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 A0A1B0GU03 582 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 MFSD2BA6NFX1 497 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 PITX3O75364 302 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 ADAP1O75689 374 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 IFNA17P01571 189 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 H2AFB2P0C5Z0 115 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 SLC25A6P12236 298 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 DEFA4P12838 97 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 HIST1H1BP16401 226 aaKnown RBP5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 MYCNOSP40205 109 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 HOXA1P49639 335 aaPredicted RBP5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 RAB25P57735 213 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 DEFA1P59665 94 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 DEFA3P59666 94 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 SPCS3P61009 180 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 ZNF616Q08AN1 781 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 SMCO1Q147U7 214 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 C15orf32Q32M92 178 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 BSXQ3C1V8 233 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 ZNF343Q6P1L6 599 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 DUSP18Q8NEJ0 188 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 OR1P1Q8NH06 330 aa5.38□□□□□ -1.55
LPCAT3-209ENST00000540060 OR52E5Q8NH55 327 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms