RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SBF1O95248 1867 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 ICAM4Q14773 271 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 OSR1Q8TAX0 266 aaPredicted RBP12.18□□□□□ -0.46
CACNB1-206ENST00000539338 TRBV9A0A0B4J1U6 114 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 TRAV24A0A0B4J272 114 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 F8VVB4 439 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 F8VWA3 439 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 RAMP3O60896 148 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 RAB37Q96AX2 223 aa12.18□□□□□ -0.46
CACNB1-206ENST00000539338 MRPL20Q9BYC9 149 aaKnown RBP12.18□□□□□ -0.46
CACNB1-206ENST00000539338 IGKV1-12A0A0C4DH73 117 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 A0A1B0GV90 55 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 A0A1W2PS18 150 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 RBFOX2O43251 390 aaKnown RBP eCLIP12.17□□□□□ -0.46
CACNB1-206ENST00000539338 IGKV1D-12P01611 117 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 SLC25A34Q6PIV7 304 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 KLK15Q9H2R5 256 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 WFDC1Q9HC57 220 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 SS18L1O75177 396 aaPredicted RBP12.17□□□□□ -0.46
CACNB1-206ENST00000539338 NBEAP1P0C6P0 100 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
CACNB1-206ENST00000539338 NUDT3O95989 172 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 BSPH1Q075Z2 132 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 PIP4P1Q86T03 277 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 PHLDA3Q9Y5J5 127 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
CACNB1-206ENST00000539338 ZIC4Q8N9L1 334 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
CACNB1-206ENST00000539338 IL36BQ9NZH7 164 aa12.17□□□□□ -0.46
CACNB1-206ENST00000539338 HBBP68871 147 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 ATP5IP56385 69 aaPredicted RBP12.16□□□□□ -0.46
CACNB1-206ENST00000539338 CCL20P78556 96 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
CACNB1-206ENST00000539338 OR10AG1Q8NH19 301 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 TP53BP1Q12888 1972 aaPredicted RBP12.16□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3-49A0A0A0MS15 119 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 GAGE10A6NGK3 116 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
CACNB1-206ENST00000539338 GCSHP23434 173 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 WNT10AQ9GZT5 417 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
CACNB1-206ENST00000539338 HLA-DRB1P01911 266 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 LCN2P80188 198 aa12.16□□□□□ -0.46
CACNB1-206ENST00000539338 FGF16O43320 207 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 MPZP25189 248 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
CACNB1-206ENST00000539338 CCL3L1P16619 93 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 RPS20P60866 119 aaKnown RBP12.15□□□□□ -0.46
CACNB1-206ENST00000539338 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
CACNB1-206ENST00000539338 ATP5G2Q06055 141 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3-66A0A0C4DH42 116 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 H7C2G1 150 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 ZNF324O75467 553 aaPredicted RBP12.15□□□□□ -0.46
CACNB1-206ENST00000539338 CRYGSP22914 178 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 ZNF497Q6ZNH5 498 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.15□□□□□ -0.46
CACNB1-206ENST00000539338 A0A087WWC5 75 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 MUC21A0A0G2JKD1 596 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 MUC21A0A140T8X8 626 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 TM4SF5O14894 197 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 MUC21Q5SSG8 566 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 DNLZQ5SXM8 178 aa12.15□□□□□ -0.46
CACNB1-206ENST00000539338 IGHV3OR16-8A0A075B7F1 116 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 SAA2-SAA4A0A096LPE2 208 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 CLPSP04118 112 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 SAA2P0DJI9 122 aaPredicted RBP12.14□□□□□ -0.47
CACNB1-206ENST00000539338 Q5PR19 223 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 RNF144BQ7Z419 303 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 FOXA2Q9Y261 457 aaPredicted RBP12.14□□□□□ -0.47
CACNB1-206ENST00000539338 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 PEX7O00628 323 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 WDR82Q6UXN9 313 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 RTN4RL2Q86UN3 420 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 ACACAQ13085 2346 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 ARL6IP6Q8N6S5 226 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 C8orf46Q8TAG6 207 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 AKAP6Q13023 2319 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 IGHV3OR16-12A0A075B7B8 117 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 C7orf71A4D174 169 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 DPRXA6NFQ7 191 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 E9PQ18 207 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 GPX1P07203 203 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 NPPCP23582 126 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 Q6ZS92 163 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 TCF24Q7RTU0 167 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 FAM131CQ96AQ9 280 aa12.14□□□□□ -0.47
CACNB1-206ENST00000539338 CTAG1AP78358 180 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 ID3Q02535 119 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
CACNB1-206ENST00000539338 ZCCHC24Q8N2G6 241 aaKnown RBP12.13□□□□□ -0.47
CACNB1-206ENST00000539338 CDKN1AP38936 164 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
CACNB1-206ENST00000539338 NABP1Q96AH0 204 aa12.13□□□□□ -0.47
CACNB1-206ENST00000539338 TBL2Q9Y4P3 447 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms