RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 FBXL12Q9NXK8 326 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 PRELID3BQ9Y3B1 194 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 DENND4BO75064 1496 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-209ENST00000539197 CUL9Q8IWT3 2517 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 REREQ9P2R6 1566 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 FLT4P35916 1363 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 TRAV26-2A0A0B4J265 109 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 PQLC2LA1A4F0 135 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 FABP5P3A8MUU1 101 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 C1QAP02745 245 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 TTRP02766 147 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 SERPINA7P05543 415 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 CTXN2P0C2S0 81 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 TRGC1P0CF51 173 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 RPS4Y1P22090 263 aaKnown RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BOP23527 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BBP33778 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 G6PCP35575 357 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 ANP32AP39687 249 aaKnown RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 EMP1P54849 157 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BDP58876 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BCP62807 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 CCL7P80098 99 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 RELAQ04206 551 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 FADDQ13158 208 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 STX5Q13190 355 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 SRSF6Q13247 344 aaKnown RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST2H2BEQ16778 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 IBA57Q5T440 356 aaKnown RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 C9orf64Q5T6V5 341 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 SPOPLQ6IQ16 392 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 LPCAT3Q6P1A2 487 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 BPIFA4PQ86YQ2 179 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 C9orf163Q8N9P6 203 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 MRPL30Q8TCC3 161 aaKnown RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BHQ93079 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 PRAP1Q96NZ9 151 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 TSPAN32Q96QS1 320 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BNQ99877 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H2BMQ99879 126 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 NIPSNAP1Q9BPW8 284 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM147Q9BVK8 224 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 RNASE7Q9H1E1 156 aaKnown RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 DCSTAMPQ9H295 470 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 PRTFDC1Q9NRG1 225 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 C14orf105Q9NVL8 296 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 SLC22A13Q9Y226 551 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
CCDC7-209ENST00000539197 RTTNQ86VV8 2226 aa0.89□□□□□ -2.27
CCDC7-209ENST00000539197 KIF24Q5T7B8 1368 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 TRBV10-2A0A0K0K1G8 114 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 IRGMA1A4Y4 181 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 OR51F1A6NGY5 319 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 SLC22A1O15245 554 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 ORC5O43913 435 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 CIAO1O76071 339 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 CRYZL1O95825 349 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 MSMBP08118 114 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 ERVS71-1P61550 626 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H4AP62805 103 aaKnown RBP0.88□□□□□ -2.27
CCDC7-209ENST00000539197 CDK10Q15131 360 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 MOGQ16653 247 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM42Q69YG0 159 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 FAM173BQ6P4H8 233 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 COMMD5Q9GZQ3 224 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 C8orf4Q9NR00 106 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 UQCC1Q9NVA1 299 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 GLTPQ9NZD2 209 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 FBXO5Q9UKT4 447 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM56-RWDD3S4R434 201 aa0.88□□□□□ -2.27
CCDC7-209ENST00000539197 ROBO3Q96MS0 1386 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 EXOC1LA0A1B0GW35 172 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 MEIS3P1A6NDR6 274 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 DPRXA6NFQ7 191 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM210A6NLX4 147 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 IBA57-AS1B1ANH7 110 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 FADS1O60427 444 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 ATP5HO75947 161 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 HAND1O96004 215 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 IFNA6P05013 189 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 DEFA3P59666 94 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 REEP5Q00765 189 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 EDDM3AQ14507 147 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 C7orf65Q6ZTY9 151 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 S100A7AQ86SG5 101 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 CLVS1Q8IUQ0 354 aaPredicted RBP0.87□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM86AQ8N2M4 240 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 OR52R1Q8NGF1 315 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 OR13C4Q8NGS5 318 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 RASSF5Q8WWW0 418 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 DNAJC9Q8WXX5 260 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 H1FXQ92522 213 aaKnown RBP0.87□□□□□ -2.27
CCDC7-209ENST00000539197 BORCS7Q96B45 105 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 TOMM6Q96B49 74 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 Q96M85 177 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 IDI2-AS1Q9NZ38 188 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 BAIAP2Q9UQB8 552 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 CYSLTR1Q9Y271 337 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 KDM5BQ9UGL1 1544 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms