RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TGOLN2O43493 480 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 CBLN1P23435 193 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 PPP5CP53041 499 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 ELLP55199 621 aaPredicted RBP8.74□□□□□ -1.01
RTN3-209ENST00000538995 PRCDQ00LT1 54 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 SURF2Q15527 256 aaPredicted RBP8.74□□□□□ -1.01
RTN3-209ENST00000538995 SLC25A24Q6NUK1 477 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 PLET1Q6UQ28 207 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 ZNF114Q8NC26 417 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 OR4D10Q8NGI6 311 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 BSCL2Q96G97 398 aaPredicted RBP8.74□□□□□ -1.01
RTN3-209ENST00000538995 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 ZNF436Q9C0F3 470 aaPredicted RBP8.74□□□□□ -1.01
RTN3-209ENST00000538995 SLC2A8Q9NY64 477 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 COPZ2Q9P299 210 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 UFC1Q9Y3C8 167 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 DNAH7Q8WXX0 4024 aa8.74□□□□□ -1.01
RTN3-209ENST00000538995 C3orf85A0A1B0GTC6 90 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 DBX1A6NMT0 343 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 CTSDP07339 412 aaPredicted RBP8.73□□□□□ -1.01
RTN3-209ENST00000538995 P0C879 139 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 PI3P19957 117 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 MFAP2P55001 183 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 HSPE1P61604 102 aaKnown RBP8.73□□□□□ -1.01
RTN3-209ENST00000538995 IL18Q14116 193 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 SCGB2B2Q4G0G5 96 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 OR2C3Q8N628 320 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 OR13C8Q8NGS7 320 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 DIRAS2Q96HU8 199 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 TP53RKQ96S44 253 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 SLIRPQ9GZT3 109 aaKnown RBP8.73□□□□□ -1.01
RTN3-209ENST00000538995 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
RTN3-209ENST00000538995 C21orf62Q9NYP8 219 aa8.73□□□□□ -1.01
RTN3-209ENST00000538995 RSL24D1Q9UHA3 163 aaKnown RBP8.73□□□□□ -1.01
RTN3-209ENST00000538995 ZNF785A8K8V0 405 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 DISC1C4P0D8 188 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 INS-IGF2F8WCM5 200 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 H3BMQ9 156 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 K7EIM0 57 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 GSTZ1O43708 216 aaPredicted RBP8.72□□□□□ -1.01
RTN3-209ENST00000538995 AKAIN1P0CW23 69 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 C8orf88P0DMB2 117 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 UCP1P25874 307 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 FCGR2BP31994 310 aaPredicted RBP8.72□□□□□ -1.01
RTN3-209ENST00000538995 AKR1C2P52895 323 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 CD81P60033 236 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 ZNF57Q68EA5 555 aaPredicted RBP8.72□□□□□ -1.01
RTN3-209ENST00000538995 UNQ9165/PRO28630Q6UXU0 137 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 SCARB1Q8WTV0 552 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 TMEM190Q8WZ59 177 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 ISOC1Q96CN7 298 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 NEURL2Q9BR09 285 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 C6orf62Q9GZU0 229 aaPredicted RBP8.72□□□□□ -1.01
RTN3-209ENST00000538995 TUBA4BQ9H853 241 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 PLEKHA3Q9HB20 300 aa8.72□□□□□ -1.01
RTN3-209ENST00000538995 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
RTN3-209ENST00000538995 TRAV25A0A0B4J276 109 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 OR2T8A6NH00 312 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 F8W735 103 aaPredicted RBP8.71□□□□□ -1.02
RTN3-209ENST00000538995 NDUFA4O00483 81 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 IGKV1-5P01602 117 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 ERHP84090 104 aaKnown RBP8.71□□□□□ -1.02
RTN3-209ENST00000538995 GUCA2BQ16661 112 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 TRIM16LQ309B1 348 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 SLC16A13Q7RTY0 426 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 FAM219AQ8IW50 185 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 TMEM61Q8N0U2 210 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 UXS1Q8NBZ7 420 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 MARCH1Q8TCQ1 289 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 PRRT1Q99946 306 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 SPATA25Q9BR10 227 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.02
RTN3-209ENST00000538995 MLXQ9UH92 298 aa8.71□□□□□ -1.02
RTN3-209ENST00000538995 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.02
RTN3-209ENST00000538995 A0A0B4J293 547 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 C3orf84H3BNL1 204 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 EDN2P20800 178 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
RTN3-209ENST00000538995 HAGHQ16775 308 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 ANKRD55Q3KP44 614 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 Q56UQ5 140 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 BTNL8Q6UX41 500 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 SLC35G3Q8N808 338 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 OR4C16Q8NGL9 310 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 RRNAD1Q96FB5 475 aaKnown RBP8.7□□□□□ -1.02
RTN3-209ENST00000538995 WDR89Q96FK6 387 aaPredicted RBP8.7□□□□□ -1.02
RTN3-209ENST00000538995 TXN2Q99757 166 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 SOSTQ9BQB4 213 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 PDCD10Q9BUL8 212 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 NXF2Q9GZY0 626 aaKnown RBP8.7□□□□□ -1.02
RTN3-209ENST00000538995 TMEM222Q9H0R3 208 aa8.7□□□□□ -1.02
RTN3-209ENST00000538995 ANKRD20A5PA0PJZ0 165 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 I3L2K1 104 aa8.69□□□□□ -1.02
RTN3-209ENST00000538995 K7EMT4 169 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms