RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ARL3	P36405	182 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	ETV6	P41212	452 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	DEFA5	Q01523	94 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	CLEC19A	Q6UXS0	136 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	OR2C3	Q8N628	320 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	OR10W1	Q8NGF6	305 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	MARCH1	Q8TCQ1	289 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	IL22RA2	Q969J5	263 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	MARC2	Q969Z3	335 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	GALNT14	Q96FL9	552 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	BSCL2	Q96G97	398 aa	Predicted RBP	9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TP53RK	Q96S44	253 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TXN2	Q99757	166 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	RTBDN	Q9BSG5	229 aa	Predicted RBP	9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TMEM222	Q9H0R3	208 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	PALMD	Q9NP74	551 aa		9.36	□□□□□ -0.91
CLTCL1-205	ENST00000538828	REG1A	P05451	166 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	CLEC3B	P05452	202 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	PPP5C	P53041	499 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	ERH	P84090	104 aa	Known RBP	9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	PVRIG	Q6DKI7	326 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	OR52E5	Q8NH55	327 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	GLYATL2	Q8WU03	294 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	RBPMS	Q93062	196 aa	Known RBP	9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	RRNAD1	Q96FB5	475 aa	Known RBP	9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	THAP7	Q9BT49	309 aa	Predicted RBP	9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	C5orf66	Q9H5L9	145 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	ZC4H2	Q9NQZ6	224 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	NDUFA13	Q9P0J0	144 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	KCNIP3	Q9Y2W7	256 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	NSG2	Q9Y328	171 aa		9.35	□□□□□ -0.91
CLTCL1-205	ENST00000538828	STAB2	Q8WWQ8	2551 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	MFSD2B	A6NFX1	497 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	CCDC160	A6NGH7	325 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	CRYM-AS1	A6NIL9	109 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	C2orf70	A6NJV1	201 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	DBX1	A6NMT0	343 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TGOLN2	O43493	480 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	OR2C1	O95371	312 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	IGKV1-5	P01602	117 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	HLA-A	P01891	365 aa	Known RBP	9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	C8orf88	P0DMB2	117 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	PI3	P19957	117 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	AKR1C2	P52895	323 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	SLC25A24	Q6NUK1	477 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	C19orf35	Q6ZS72	473 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	CCDC190	Q86UF4	302 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828		Q8N1Y9	231 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	OR51S1	Q8NGJ8	323 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TRIM63	Q969Q1	353 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	ZNF436	Q9C0F3	470 aa	Predicted RBP	9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	NAA60	Q9H7X0	242 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	C21orf62	Q9NYP8	219 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TMEM56-RWDD3	S4R434	201 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828		V9GYH0	126 aa		9.34	□□□□□ -0.91
CLTCL1-205	ENST00000538828	TRAV25	A0A0B4J276	109 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828		A0A0B4J293	547 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	PPP5D1	E7EU14	171 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828		K7EIM0	57 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	CORT	O00230	105 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	FOLR2	P14207	255 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	MFAP2	P55001	183 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	TRIM16L	Q309B1	348 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	DEFB114	Q30KQ6	69 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	PLET1	Q6UQ28	207 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SGPP2	Q8IWX5	399 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SCARB1	Q8WTV0	552 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	PDCD10	Q9BUL8	212 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	HINT2	Q9BX68	163 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	PLEKHA3	Q9HB20	300 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	C19orf73	Q9NVV2	129 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	MRPL27	Q9P0M9	148 aa	Known RBP	9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	UFC1	Q9Y3C8	167 aa		9.33	□□□□□ -0.92
CLTCL1-205	ENST00000538828	TMEM213	A2RRL7	107 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828		K7EMT4	169 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	NDUFA4	O00483	81 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	OR5AC1	P0C628	307 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	CBLN1	P23435	193 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SUB1	P53999	127 aa	Known RBP eCLIP	9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SPCS3	P61009	180 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SRPX	P78539	464 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	KLF9	Q13886	244 aa	Predicted RBP	9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	ZNF79	Q15937	498 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SPANXN2	Q5MJ10	180 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	FAAP20	Q6NZ36	180 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	ADAMTSL5	Q6ZMM2	481 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	GTSCR1	Q86UQ5	136 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SLC25A21	Q9BQT8	299 aa	Predicted RBP	9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828	TENM3	Q9P273	2699 aa		9.32	□□□□□ -0.92
CLTCL1-205	ENST00000538828		F8W735	103 aa	Predicted RBP	9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828		I3L2K1	104 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	ST8SIA3	O43173	380 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	GPR183	P32249	361 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	MFAP4	P55083	255 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	BSX	Q3C1V8	233 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SP6	Q3SY56	376 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	TOMM5	Q8N4H5	51 aa		9.31	□□□□□ -0.92
CLTCL1-205	ENST00000538828	SLC35G3	Q8N808	338 aa		9.31	□□□□□ -0.92

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