RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SLC35D1Q9NTN3 355 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 TEX50A0A1B0GTY4 177 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 ITGB1BP1O14713 200 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 SPINK4O60575 86 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 GCGP01275 180 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 PAX1P15863 534 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 CRYBB3P26998 211 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 RAB31Q13636 194 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 ZNF788Q6ZQV5 615 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 IL19Q9UHD0 177 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
CPNE8-203ENST00000538596 UPK2O00526 184 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 SAA1P0DJI8 122 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 CCL3L1P16619 93 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 OR10J1P30954 320 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 PRCDQ00LT1 54 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 C1orf185Q5T7R7 199 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 EAF1Q96JC9 268 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 TXNDC17Q9BRA2 123 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 TP53TG3Q9ULZ0 132 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 E7EUB6 86 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 FCN3O75636 299 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 IGHV3-48P01763 117 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 CD40P25942 277 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 SLC25A48Q6ZT89 311 aaKnown RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 DOLPP1Q86YN1 238 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
CPNE8-203ENST00000538596 MRPL20Q9BYC9 149 aaKnown RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 RPUSD1Q9UJJ7 312 aaKnown RBP9.75□□□□□ -0.85
CPNE8-203ENST00000538596 F2Z2F3 143 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 MKRN2OSH3BPM6 223 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 OR7C2O60412 319 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 CCKARP32238 428 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 DIAPH2-AS1Q14236 149 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 KRTCAP3Q53RY4 240 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 MORN5Q5VZ52 161 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 PRNDQ9UKY0 176 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 ZZEF1O43149 2961 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 CEP295Q9C0D2 2601 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 CHRNB4P30926 498 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 SELENOVP59797 346 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 ERVFC1-1P60608 527 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 SLC35B1P78383 322 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
CPNE8-203ENST00000538596 CENPWQ5EE01 88 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 PQLC2Q6ZP29 291 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
CPNE8-203ENST00000538596 OR2T6Q8NHC8 308 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 RNASE7Q9H1E1 156 aaKnown RBP9.74□□□□□ -0.85
CPNE8-203ENST00000538596 IL36BQ9NZH7 164 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 CSMD1Q96PZ7 3565 aa9.74□□□□□ -0.85
CPNE8-203ENST00000538596 IER3P46695 156 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 LINC00310P59036 64 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 FXYD3Q14802 87 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 C11orf52Q96A22 123 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 UHRF2Q96PU4 802 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 FKBP11Q9NYL4 201 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 LRBAP50851 2863 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 POLEQ07864 2286 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 TRAV5A0A0B4J249 113 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 A8MXE2 369 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 YPEL3P61236 119 aaPredicted RBP9.73□□□□□ -0.85
CPNE8-203ENST00000538596 RTL8BQ17RB0 113 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 OR8I2Q8N0Y5 310 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 RBMXL3Q8N7X1 1067 aaKnown RBP9.73□□□□□ -0.85
CPNE8-203ENST00000538596 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
CPNE8-203ENST00000538596 NCOR1P1Q9H4R4 102 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 HELTA6NFD8 242 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 GGTLC3B5MD39 225 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 TM4SF5O14894 197 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 MT-CO2P00403 227 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 RNASE2P10153 161 aaKnown RBP9.73□□□□□ -0.85
CPNE8-203ENST00000538596 C10orf55Q5SWW7 151 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 Q6ZS92 163 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 MMD2Q8IY49 270 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 OR1L6Q8NGR2 347 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 MS4A10Q96PG2 267 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 SH3BGRL2Q9UJC5 107 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 V9GYV3 84 aa9.73□□□□□ -0.85
CPNE8-203ENST00000538596 TPRP12270 2363 aaKnown RBP9.72□□□□□ -0.85
CPNE8-203ENST00000538596 IRF2P14316 349 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 GNG4P50150 75 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 TCL1AP56279 114 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 LGALS4P56470 323 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 SUMO1P63165 101 aaKnown RBP9.72□□□□□ -0.85
CPNE8-203ENST00000538596 WFDC8Q8IUA0 241 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 RAB9BQ9NP90 201 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 SLC25A10Q9UBX3 287 aaPredicted RBP9.72□□□□□ -0.85
CPNE8-203ENST00000538596 ABCA1O95477 2261 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 TNFSF4P23510 183 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 USF2Q15853 346 aaPredicted RBP9.72□□□□□ -0.85
CPNE8-203ENST00000538596 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
CPNE8-203ENST00000538596 ST6GALNAC3Q8NDV1 305 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms