RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SLC25A24Q6NUK1 477 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 Q8N402 240 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 GLYATL2Q8WU03 294 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 TMEM230Q96A57 120 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 PRRT1Q99946 306 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 NAA60Q9H7X0 242 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 PRR13Q9NZ81 148 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 C14orf166Q9Y224 244 aaKnown RBP10□□□□□ -0.81
PRKDC-206ENST00000536429 SELENOKQ9Y6D0 94 aa10□□□□□ -0.81
PRKDC-206ENST00000536429 DNAH7Q8WXX0 4024 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 IGHV3-35A0A0C4DH35 117 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 K7EIM0 57 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 S100A5P33763 92 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 AKR1C2P52895 323 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 HSPE1P61604 102 aaKnown RBP9.99□□□□□ -0.81
PRKDC-206ENST00000536429 PRCDQ00LT1 54 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 TATDN3Q17R31 274 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 Q6ZRM9 215 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 HSD17B13Q7Z5P4 300 aaPredicted RBP9.99□□□□□ -0.81
PRKDC-206ENST00000536429 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 CXorf58Q96LI9 332 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 TMEM222Q9H0R3 208 aa9.99□□□□□ -0.81
PRKDC-206ENST00000536429 TRBV7-1A0A0A6YYK4 115 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 TEX13DA0A0J9YY54 714 aaPredicted RBP9.98□□□□□ -0.81
PRKDC-206ENST00000536429 C2orf70A6NJV1 201 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 F8W735 103 aaPredicted RBP9.98□□□□□ -0.81
PRKDC-206ENST00000536429 ST8SIA3O43173 380 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 CDS2O95674 445 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 CD69Q07108 199 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 UNQ9165/PRO28630Q6UXU0 137 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 SELENOHQ8IZQ5 122 aaKnown RBP9.98□□□□□ -0.81
PRKDC-206ENST00000536429 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 TMEM56Q96MV1 263 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 ASCL2Q99929 193 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 SRRQ9GZT4 340 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 SCP2D1Q9UJQ7 156 aa9.98□□□□□ -0.81
PRKDC-206ENST00000536429 TMEM213A2RRL7 107 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 IGHV3-48P01763 117 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 FAM209BQ5JX69 171 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 GPHB5Q86YW7 130 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 Q8N1Y9 231 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 OR1P1Q8NH06 330 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 SCARB1Q8WTV0 552 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 CHRDL1Q9BU40 450 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 PLEKHA3Q9HB20 300 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 THYN1Q9P016 225 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 PEMTQ9UBM1 199 aa9.97□□□□□ -0.81
PRKDC-206ENST00000536429 ZNF320A2RRD8 509 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 I3L2K1 104 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 LGALS9O00182 355 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 TGOLN2O43493 480 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 B3GALNT1O75752 331 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 FOLR2P14207 255 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 ETV6P41212 452 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 SUPT4H1P63272 117 aaKnown RBP9.96□□□□□ -0.82
PRKDC-206ENST00000536429 TMEM187Q14656 261 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 BAK1Q16611 211 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
PRKDC-206ENST00000536429 TMEM268Q5VZI3 342 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 TOMM5Q8N4H5 51 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 RNASE11Q8TAA1 199 aaKnown RBP9.96□□□□□ -0.82
PRKDC-206ENST00000536429 RBPMSQ93062 196 aaKnown RBP9.96□□□□□ -0.82
PRKDC-206ENST00000536429 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 RRNAD1Q96FB5 475 aaKnown RBP9.96□□□□□ -0.82
PRKDC-206ENST00000536429 MISP3Q96FF7 219 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 ZNF414Q96IQ9 312 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 SDHCQ99643 169 aaPredicted RBP9.96□□□□□ -0.82
PRKDC-206ENST00000536429 C21orf62Q9NYP8 219 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 SMAD5-AS1Q9Y6J3 95 aa9.96□□□□□ -0.82
PRKDC-206ENST00000536429 CYB5BO43169 146 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 ATG12O94817 140 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 IFNA17P01571 189 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 AKR1C4P17516 323 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 ADMP35318 185 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 DHODHQ02127 395 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 DCTN2Q13561 401 aaKnown RBP9.95□□□□□ -0.82
PRKDC-206ENST00000536429 DEFB114Q30KQ6 69 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 TM4SF20Q53R12 229 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 PLET1Q6UQ28 207 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 SGPP2Q8IWX5 399 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 UBAC2Q8NBM4 344 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 CACNG5Q9UF02 275 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 TMEM56-RWDD3S4R434 201 aa9.95□□□□□ -0.82
PRKDC-206ENST00000536429 A8MWP6 167 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 MT-CO2P00403 227 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 CBLN1P23435 193 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 FAUP35544 74 aaKnown RBP9.94□□□□□ -0.82
PRKDC-206ENST00000536429 HOXA1P49639 335 aaPredicted RBP9.94□□□□□ -0.82
PRKDC-206ENST00000536429 AP3S2P59780 193 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 ERHP84090 104 aaKnown RBP9.94□□□□□ -0.82
PRKDC-206ENST00000536429 FAM106AQ4KMX7 169 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 AARDQ4LEZ3 155 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 SPANXN2Q5MJ10 180 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms