RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PPP5D1E7EU14 171 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 ATP5G3P48201 142 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 UBE2G2P60604 165 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 GNB1P62873 340 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 PRCDQ00LT1 54 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 OR10X1Q8NGY0 326 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 HARBI1Q96MB7 349 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 TXNDC17Q9BRA2 123 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 F6UZH7 168 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 COL8A2P25067 703 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 SRP14P37108 136 aaKnown RBP10.86□□□□□ -0.67
VPS33B-202ENST00000535906 TMEM155Q4W5P6 130 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 CST9LP1Q5W188 147 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 MUC15Q8N387 334 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 C11orf42Q8N5U0 333 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-202ENST00000535906 SSMEM1Q8WWF3 244 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 PLEKHA3Q9HB20 300 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 TACC2O95359 2948 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 CXorf1O96002 111 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 APOA2P02652 100 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 ARL14EPLP0DKL9 152 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-202ENST00000535906 ADORA2A-AS1P86434 159 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 LINC01551Q86U37 167 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 ZNF596Q8TC21 504 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 ST6GALNAC6Q969X2 333 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 PCGF1Q9BSM1 259 aa10.86□□□□□ -0.67
VPS33B-202ENST00000535906 GGCTO75223 188 aaKnown RBP10.85□□□□□ -0.67
VPS33B-202ENST00000535906 CD99P14209 185 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 FABP4P15090 132 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 TEPPQ6URK8 271 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 LINC00311Q8N616 119 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 OR10W1Q8NGF6 305 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 NABP2Q9BQ15 211 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 A0A1W2PPQ1 181 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 NDUFB4O95168 129 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 TMEM177Q53S58 311 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 MOB3BQ86TA1 216 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 TMEM183AQ8IXX5 376 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 C8orf31Q8N9H6 132 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 OR2T10Q8NGZ9 312 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 TMEM186Q96B77 213 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 FLYWCH2Q96CP2 140 aaKnown RBP10.85□□□□□ -0.67
VPS33B-202ENST00000535906 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
VPS33B-202ENST00000535906 CHD8Q9HCK8 2581 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 A0A087X0M5 115 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 TRAV20A0A0B4J274 112 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 A0A1B0GX30 115 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 E7EUB6 86 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 DLX1P56177 255 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 CDPF1Q6NVV7 123 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 KCNIP4Q6PIL6 250 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 OR5B3Q8NH48 314 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 DERL1Q9BUN8 251 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 FKBP11Q9NYL4 201 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 MALRD1Q5VYJ5 2156 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 TYMSP04818 313 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 ZNF672Q499Z4 452 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-202ENST00000535906 DNLZQ5SXM8 178 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 OR5T1Q8NG75 326 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 OR4C13Q8NGP0 309 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 OR9G1Q8NH87 305 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-202ENST00000535906 HIST1H2BLQ99880 126 aa10.84□□□□□ -0.67
VPS33B-202ENST00000535906 COL6A6A6NMZ7 2263 aa10.83□□□□□ -0.67
VPS33B-202ENST00000535906 IGFBP2P18065 325 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 CLEC12BQ2HXU8 276 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 COA6Q5JTJ3 125 aaKnown RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 STPG3Q8N7X2 389 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 NCOR2Q9Y618 2525 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 HRNRQ86YZ3 2850 aaPredicted RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 FNDC10F2Z333 226 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 HIST1H1BP16401 226 aaKnown RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 CHRNA7P36544 502 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 RPL29P47914 159 aaKnown RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 ZNF137PP52743 207 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 RPL8P62917 257 aaKnown RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 LCN2P80188 198 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 RAB31Q13636 194 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 MLANAQ16655 118 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 ACTL10Q5JWF8 245 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 ZNF841Q6ZN19 808 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 PDPNQ86YL7 162 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 PFDN5Q99471 154 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 SEPSECSQ9HD40 501 aaKnown RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
VPS33B-202ENST00000535906 RALYQ9UKM9 306 aaKnown RBP10.83□□□□□ -0.68
VPS33B-202ENST00000535906 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 RNASE2P10153 161 aaKnown RBP10.82□□□□□ -0.68
VPS33B-202ENST00000535906 RHOBP62745 196 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 PRB3Q04118 309 aaPredicted RBP10.82□□□□□ -0.68
VPS33B-202ENST00000535906 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 TGIF2LXQ8IUE1 241 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms