RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 HRASLSQ9HDD0 168 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 TMEM14BQ9NUH8 114 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 C21orf62Q9NYP8 219 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 SMPXQ9UHP9 88 aa8.26□□□□□ -1.09
CLSTN3-206ENST00000535668 CXorf65A6NEN9 183 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 INS-IGF2F8WCM5 200 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 SULT1C2O00338 296 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 LY6G6CO95867 125 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 DEFB135Q30KP9 77 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 PVRIGQ6DKI7 326 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 SSX9Q7RTT3 188 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 SECTM1Q8WVN6 248 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 MOB3AQ96BX8 217 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 CHRDL1Q9BU40 450 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 SLC5A7Q9GZV3 580 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 HRH4Q9H3N8 390 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 FKBP11Q9NYL4 201 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 DAPK2Q9UIK4 370 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 S4R3C0 116 aa8.25□□□□□ -1.09
CLSTN3-206ENST00000535668 J3QRK9 145 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 XRCC3O43542 346 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 REG1AP05451 166 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 OR13C7P0DN81 318 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 SDC2P34741 201 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 ZNF846Q147U1 533 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 CTF1Q16619 201 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 GVQW1Q8N7I0 195 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 OR10W1Q8NGF6 305 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 PHLDA1Q8WV24 401 aaPredicted RBP8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 GPHA2Q96T91 129 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 C6orf62Q9GZU0 229 aaPredicted RBP8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 MFFQ9GZY8 342 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 CSTL1Q9H114 145 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 PRNDQ9UKY0 176 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 SSR3Q9UNL2 185 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 KIAA1109Q2LD37 5005 aa8.24□□□□□ -1.09
CLSTN3-206ENST00000535668 TRAV18A0A075B6X5 111 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 IGHV7-4-1A0A0J9YVY3 117 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 OR2T8A6NH00 312 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 I3L2K1 104 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 CHEK1O14757 476 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 PGLYRP1O75594 196 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 DFFBO76075 338 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 S1PR2O95136 353 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 PSMB9P28065 219 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 RELQ04864 619 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 TMEM56Q96MV1 263 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 NXF2Q9GZY0 626 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 VSIRQ9H7M9 311 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 DIABLOQ9NR28 239 aa8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 CCDC59Q9P031 241 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-206ENST00000535668 MPTX1A8MV57 137 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 TNFSF12O43508 249 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 TMEM41BQ5BJD5 291 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 RPP25LQ8N5L8 163 aaKnown RBP8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 DMBX1Q8NFW5 382 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 OR5H6Q8NGV6 325 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 FCAMRQ8WWV6 532 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 RNF2Q99496 336 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 RHPN1-AS1Q9BWJ2 59 aa8.22□□□□□ -1.09
CLSTN3-206ENST00000535668 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.09
CLSTN3-206ENST00000535668 PCLOQ9Y6V0 5065 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 C15orf61A6NNL5 157 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 CTSDP07339 412 aaPredicted RBP8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 PTHLHP12272 177 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 UCP3P55916 312 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 ERVK-16P61578 105 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 AADACL3Q5VUY0 350 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 SLC25A24Q6NUK1 477 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 CMTM1Q8IZ96 169 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 TMEM116Q8NCL8 245 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 SEC22AQ96IW7 307 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 RARRES2Q99969 163 aa8.21□□□□□ -1.1
CLSTN3-206ENST00000535668 TRAV14DV4A0A0A6YYC5 116 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 C11orf94C9JXX5 98 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 GPR31O00270 319 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 NUPL2O15504 423 aaKnown RBP8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 ZNF182P17025 639 aaPredicted RBP8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 TAS2R46P59540 309 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 PMS2P11Q13670 270 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 LPCAT3Q6P1A2 487 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 OR51H1Q8NH63 302 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 DYNC2LI1Q8TCX1 351 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 S100A16Q96FQ6 103 aaKnown RBP8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 CMTM3Q96MX0 182 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 UBQLN2Q9UHD9 624 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 OR51B2Q9Y5P1 312 aa8.2□□□□□ -1.1
CLSTN3-206ENST00000535668 PKHD1P08F94 4074 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 SMIM30A4D0T7 59 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 SNAPC5O75971 98 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 KRASP01116 189 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 RPA2P15927 270 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 S100A5P33763 92 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 LPAR6P43657 344 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 MFAP4P55083 255 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 HSPE1P61604 102 aaKnown RBP8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 PRCDQ00LT1 54 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 AARDQ4LEZ3 155 aa8.19□□□□□ -1.1
CLSTN3-206ENST00000535668 LYSMD2Q8IV50 215 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms