RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 PSMB11A5LHX3 300 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 HSBP1L1C9JCN9 74 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 SLC17A2O00624 439 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 IGLL1P15814 213 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 IL3RAP26951 378 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 RPS20P60866 119 aaKnown RBP6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 ZNF816Q0VGE8 651 aaPredicted RBP6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 ELOBQ15370 118 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 RAB11BQ15907 218 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 SOHLH1Q5JUK2 328 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 Q6ZRG5 221 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 C5orf24Q7Z6I8 188 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 ZNF329Q86UD4 541 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 NKAIN3Q8N8D7 197 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 C5orf56Q8N8D9 126 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 OR10V1Q8NGI7 309 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 OR52M1Q8NGK5 317 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 ACY3Q96HD9 319 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 C2orf50Q96LR7 162 aa6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 RIMS4Q9H426 269 aaPredicted RBP6.77□□□□□ -1.33
SFSWAP-202ENST00000535202 TRAV18A0A075B6X5 111 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 BORCS7-ASMTA0A0B4J1R7 106 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 C5orf51A6NDU8 294 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 NCBP2LA6PVI3 153 aaKnown RBP6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 SERPINE3A8MV23 424 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 C12orf77C9JDV5 145 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 PHOX2AO14813 284 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 SPINT2O43291 252 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 OR8U9P0C7N5 309 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 FABP4P15090 132 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 RAB6AP20340 208 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 G0S2P27469 103 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 LOXL3P58215 753 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 PNRC1Q12796 327 aaPredicted RBP6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 PLA2G7Q13093 441 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 IL15RAQ13261 267 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 PPP1R1AQ13522 171 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 SMIM15Q7Z3B0 74 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 LINC00311Q8N616 119 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 TMEM104Q8NE00 496 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 OR2D3Q8NGH3 330 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 OR8U1Q8NH10 309 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 OR1L1Q8NH94 360 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 MRAPQ8TCY5 172 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM46BQ96A09 425 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 SEC22AQ96IW7 307 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 CYYR1Q96J86 154 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM210BQ96KR6 192 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 Q96M66 194 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 ZNF2Q9BSG1 426 aaPredicted RBP6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 RAB9BQ9NP90 201 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 NECAP2Q9NVZ3 263 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 GNG12Q9UBI6 72 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 LINC00527Q9UJ94 153 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 VSIG4Q9Y279 399 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 H0YIZ8 118 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 MPIG6BO95866 241 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 HBZP02008 142 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 PPBPP02775 128 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 SNRPCP09234 159 aaKnown RBP6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 AKR1C3P42330 323 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 RBX1P62877 108 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 SLC35B1P78383 322 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 LRRC37A5PQ49AS3 106 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 TMEM128Q5BJH2 165 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 TRAT1Q6PIZ9 186 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 Q6ZPA2 131 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 LYPD6Q86Y78 171 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 FOXRED2Q8IWF2 684 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 C8orf31Q8N9H6 132 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 ZNF439Q8NDP4 499 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 OR5T1Q8NG75 326 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 OR2T10Q8NGZ9 312 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 Q8WTZ3 238 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 RTN4IP1Q8WWV3 396 aaPredicted RBP6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 EAF1Q96JC9 268 aaPredicted RBP6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 GINS3Q9BRX5 216 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 CTDSP1Q9GZU7 261 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 CST11Q9H112 138 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 AURKAIP1Q9NWT8 199 aaPredicted RBP6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 ZFP30Q9Y2G7 519 aa6.75□□□□□ -1.33
SFSWAP-202ENST00000535202 K7EPK0 472 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 PDCD6O75340 191 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 CA11O75493 328 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 MOSP00540 346 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 IGHG2P01859 326 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 AMBPP02760 352 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 HSPB1P04792 205 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 TRGC1P0CF51 173 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 FUT3P21217 361 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 RPL23AP62750 156 aaKnown RBP6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 EBI3Q14213 229 aa6.74□□□□□ -1.33
SFSWAP-202ENST00000535202 GNMTQ14749 295 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms