RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 LINC00477Q96M19 166 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 C9orf85Q96MD7 179 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 SMIM7Q9BQ49 75 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 PARP12Q9H0J9 701 aaKnown RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 R3HDMLQ9H3Y0 253 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 VSIRQ9H7M9 311 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 JPT2Q9H910 190 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 WRAP73Q9P2S5 460 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 PCTPQ9UKL6 214 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 OR2W1Q9Y3N9 320 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 CHCHD2Q9Y6H1 151 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-201ENST00000535076 R4GN57 208 aa4.27□□□□□ -1.73
SNHG1-201ENST00000535076 TMED7-TICAM2A0A0A6YYA0 188 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 SMIM28A0A1B0GU29 152 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 FAM90A10PA6NDY2 464 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 C2orf70A6NJV1 201 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 C15orf61A6NNL5 157 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 RRHO14718 337 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 OVOL1O14753 267 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 ENSAO43768 121 aaKnown RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 NDUFC2O95298 119 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 CD55P08174 381 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 CECR9P0C854 216 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 GP9P14770 177 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 MPV17P39210 176 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 LEPP41159 167 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 RBM11P57052 281 aaKnown RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 PLGLB1Q02325 96 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 CFHR1Q03591 330 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 INSL4Q14641 139 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 RNPS1Q15287 305 aaKnown RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF141Q15928 474 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 CT83Q5H943 113 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 ASPHD1Q5U4P2 390 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 Q6ZSN1 163 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 C2orf91Q6ZV80 131 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF550Q7Z398 422 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 TMEM150AQ86TG1 271 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 HOGA1Q86XE5 327 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 NAA38Q9BRA0 125 aaKnown RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 TXNDC17Q9BRA2 123 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 LAMTOR3Q9UHA4 124 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 SIRT4Q9Y6E7 314 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-201ENST00000535076 PLXNA4Q9HCM2 1894 aa4.26□□□□□ -1.73
SNHG1-201ENST00000535076 ITGB4P16144 1822 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 NSG1A0A0A6YYJ2 146 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 P0DMU3 169 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 FAM231AP0DMU4 169 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 FAM231CP0DMU5 169 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 CPMP14384 443 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 PTGDSP41222 190 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 SSR4P51571 173 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 RPS14P62263 151 aaKnown RBP4.25□□□□□ -1.73
SNHG1-201ENST00000535076 LTBQ06643 244 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 HSPB3Q12988 150 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 KLF5Q13887 457 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-201ENST00000535076 GUSBP1Q15486 140 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF791Q3KP31 576 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-201ENST00000535076 TMEM14EPQ6UXP3 125 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 MOB3BQ86TA1 216 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 TBC1D26Q86UD7 250 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 SBSPONQ8IVN8 264 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 KMT2EQ8IZD2 1858 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 NPWQ8N729 165 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 PIFOQ8TCI5 191 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 CLDN23Q96B33 292 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 BMFQ96LC9 184 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 LINC00479Q96M42 142 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 ADOQ96SZ5 270 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 ZNF747Q9BV97 191 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 RNASE7Q9H1E1 156 aaKnown RBP4.25□□□□□ -1.73
SNHG1-201ENST00000535076 PELI2Q9HAT8 420 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 GNB4Q9HAV0 340 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 SLC39A9Q9NUM3 307 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 C21orf62Q9NYP8 219 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 GNG12Q9UBI6 72 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 KIF26AQ9ULI4 1882 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-201ENST00000535076 KLF12Q9Y4X4 402 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 LY96Q9Y6Y9 160 aa4.25□□□□□ -1.73
SNHG1-201ENST00000535076 NUP205Q92621 2012 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 COL5A3P25940 1745 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-201ENST00000535076 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 C3orf85A0A1B0GTC6 90 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 C1orf226A1L170 272 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 RIIAD1A6NNX1 92 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 NDUFC2-KCTD14E9PQ53 114 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 J3KTA2 159 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 CLDN14O95500 239 aa4.24□□□□□ -1.73
SNHG1-201ENST00000535076 HLA-DQA1P01909 254 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms