RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 MRPS16Q9Y3D3 137 aaKnown RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 ZNF732B4DXR9 585 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 TRAPPC2LH3BP13 241 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 FCER1GP30273 86 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 LGALS7P47929 136 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 CEBPDP49716 269 aaPredicted RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 UBE2G1P62253 170 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 SLC38A11Q08AI6 406 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 ALKBH6Q3KRA9 238 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 Q8NA96 180 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 OR8G5Q8NG78 346 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 OR5B3Q8NH48 314 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 APOBEC3DQ96AK3 386 aaPredicted RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 GMPPAQ96IJ6 420 aaPredicted RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 RCHY1Q96PM5 261 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 OR4C12Q96R67 309 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 KCNIP1Q9NZI2 227 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 CACNG5Q9UF02 275 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 ZNF469Q96JG9 3925 aaPredicted RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 C17orf112F2Z3M2 114 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 MPPED1O15442 326 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 MRPL33O75394 65 aaKnown RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 FRMD6-AS1P0C7T7 363 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 FKBP2P26885 142 aaKnown RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 HSD52Q0P140 79 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 GJC3Q8NFK1 279 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 OR1F12Q8NHA8 337 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 PIGLQ9Y2B2 252 aa7.55□□□□□ -1.2
SF3B2-216ENST00000534765 LSM4Q9Y4Z0 139 aaKnown RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 F11RQ9Y624 299 aaKnown RBP7.55□□□□□ -1.2
SF3B2-216ENST00000534765 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.54□□□□□ -1.25e-8■□□□□ 10.3
SF3B2-216ENST00000534765 IGHV2-26A0A0B4J1V2 119 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 KLRC4-KLRK1H3BQV0 150 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 LYZL6O75951 148 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 IGHV1-2P23083 117 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 KIR2DL2P43627 348 aaPredicted RBP7.54□□□□□ -1.2
SF3B2-216ENST00000534765 SPATA46Q5T0L3 261 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 ZDHHC23Q8IYP9 409 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 PLPPR1Q8TBJ4 325 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 TMEM45BQ96B21 275 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 KCNS1Q96KK3 526 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 C19orf24Q9BVV8 132 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 MBNL3Q9NUK0 354 aaKnown RBP7.54□□□□□ -1.2
SF3B2-216ENST00000534765 AGFG2O95081 481 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 COX5AP20674 150 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 FAM71F2Q6NXP2 309 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 MOB1BQ7L9L4 216 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 OR4P4Q8NGL7 312 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 TRIB1Q96RU8 372 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 JKAMPQ9P055 326 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 TEX48A0A1B0GUV7 120 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 HSPB2A8KAH6 182 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 TMEM14DPA8MWL7 114 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 CHEK1O14757 476 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 DNPH1O43598 174 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 IGHG3P01860 377 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 GPR6P46095 362 aaPredicted RBP7.54□□□□□ -1.2
SF3B2-216ENST00000534765 HSPB2Q16082 182 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 WDR82Q6UXN9 313 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 Q6ZSR3 168 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 FAM215AQ9Y5M1 114 aa7.54□□□□□ -1.2
SF3B2-216ENST00000534765 TRAV38-1A0A0B4J264 116 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 FOXI3A8MTJ6 420 aaPredicted RBP7.53□□□□□ -1.2
SF3B2-216ENST00000534765 FABP2P12104 132 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 LHFPL1Q86WI0 220 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 OR5P3Q8WZ94 311 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 ZNF71Q9NQZ8 489 aaPredicted RBP7.53□□□□□ -1.2
SF3B2-216ENST00000534765 ZNF726P1Q15940 193 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 MSMPQ1L6U9 139 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 ZNF611Q8N823 705 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 PRDM14Q9GZV8 571 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 hCG_38984A0A1B0GV85 526 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 C5orf49A4QMS7 147 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 B5MCH6 92 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 NPBWR2P48146 333 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 GAPTQ8N292 157 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 PYGO2Q9BRQ0 406 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 FBLN5Q9UBX5 448 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 CACNA1AO00555 2505 aa7.53□□□□□ -1.2
SF3B2-216ENST00000534765 A0A1W2PS18 150 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 A6NDN8 102 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 SH2D7A6NKC9 451 aaPredicted RBP7.52□□□□□ -1.21
SF3B2-216ENST00000534765 G3V4G9 280 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 SS18L1O75177 396 aaPredicted RBP7.52□□□□□ -1.21
SF3B2-216ENST00000534765 TMEM50AO95807 157 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 APCSP02743 223 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 TFF1P04155 84 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 STAG3L2P0CL84 134 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
SF3B2-216ENST00000534765 MALLQ13021 153 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 PDLIM3Q53GG5 364 aaPredicted RBP7.52□□□□□ -1.21
SF3B2-216ENST00000534765 BVES-AS1Q5T3Y7 98 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 COLCA1Q6ZS62 124 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
SF3B2-216ENST00000534765 ZNF808Q8N4W9 903 aaPredicted RBP7.52□□□□□ -1.21
SF3B2-216ENST00000534765 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms