RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SHISA2Q6UWI4 295 aa13.63□□□□□ -0.23
NXF1-216ENST00000533499 WIPF2Q8TF74 440 aaPredicted RBP13.63□□□□□ -0.23
NXF1-216ENST00000533499 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
NXF1-216ENST00000533499 TENM1Q9UKZ4 2725 aa13.63□□□□□ -0.23
NXF1-216ENST00000533499 NPIPB5A8MRT5 1133 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 IGHV3-11P01762 117 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 IAPPP10997 89 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 SLC25A6P12236 298 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 PSMB8P28062 276 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 ZBTB8BQ8NAP8 495 aaPredicted RBP13.62□□□□□ -0.23
NXF1-216ENST00000533499 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 HIPK2Q9H2X6 1198 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 MGAT4CQ9UBM8 478 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 CACFD1Q9UGQ2 172 aa13.62□□□□□ -0.23
NXF1-216ENST00000533499 C7orf66A4D0T2 115 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 CYB5BO43169 146 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 MED6O75586 246 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 CTRB1P17538 263 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 NKX2-1P43699 371 aaPredicted RBP13.61□□□□□ -0.23
NXF1-216ENST00000533499 RHOGP84095 191 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 CD83Q01151 205 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 CTRB2Q6GPI1 263 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 C11orf87Q6NUJ2 197 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 OR2C3Q8N628 320 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 KLHL30-AS1Q8NEE0 82 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 DTD1Q8TEA8 209 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 CITED1Q99966 193 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 MED28Q9H204 178 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 SLA2Q9H6Q3 261 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 HSPB7Q9UBY9 170 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 FBXL7Q9UJT9 491 aa13.61□□□□□ -0.23
NXF1-216ENST00000533499 PAIP2BQ9ULR5 123 aaKnown RBP13.61□□□□□ -0.23
NXF1-216ENST00000533499 TSSC4Q9Y5U2 329 aaPredicted RBP13.61□□□□□ -0.23
NXF1-216ENST00000533499 H3BUA1 57 aa13.6□□□□□ -0.23
NXF1-216ENST00000533499 PITX3O75364 302 aa13.6□□□□□ -0.23
NXF1-216ENST00000533499 CRYGCP07315 174 aa13.6□□□□□ -0.23
NXF1-216ENST00000533499 RPL23AP62750 156 aaKnown RBP13.6□□□□□ -0.23
NXF1-216ENST00000533499 MISP3Q96FF7 219 aa13.6□□□□□ -0.23
NXF1-216ENST00000533499 C2orf50Q96LR7 162 aa13.6□□□□□ -0.23
NXF1-216ENST00000533499 LSM5Q9Y4Y9 91 aaKnown RBP13.6□□□□□ -0.23
NXF1-216ENST00000533499 S4R3C0 116 aa13.6□□□□□ -0.23
NXF1-216ENST00000533499 IGHV3-21A0A0B4J1V1 117 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 FAM90A26D6RGX4 464 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 SSSCA1O60232 199 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 IFNA10P01566 189 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
NXF1-216ENST00000533499 SUB1P53999 127 aaKnown RBP eCLIP13.59□□□□□ -0.23
NXF1-216ENST00000533499 S100A10P60903 97 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 POLR2GP62487 172 aaKnown RBP eCLIP13.59□□□□□ -0.23
NXF1-216ENST00000533499 ATP5G2Q06055 141 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 AARDQ4LEZ3 155 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 C18orf65Q6ZTR6 163 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
NXF1-216ENST00000533499 P2RX4Q99571 388 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 ZFP57Q9NU63 452 aa13.59□□□□□ -0.23
NXF1-216ENST00000533499 F11RQ9Y624 299 aaKnown RBP13.59□□□□□ -0.23
NXF1-216ENST00000533499 A0A0G2JLM5 398 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 SYNGR2O43760 224 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 NDUFB8O95169 186 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 ZNF491Q8N8L2 437 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 OR4D5Q8NGN0 318 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 GNB4Q9HAV0 340 aa13.58□□□□□ -0.24
NXF1-216ENST00000533499 ANKRD34BA5PLL1 514 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 FAM223BA6NKX1 122 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 MFAP2P55001 183 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 EXOSC2Q13868 293 aaKnown RBP13.57□□□□□ -0.24
NXF1-216ENST00000533499 C15orf32Q32M92 178 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 C8orf86Q6ZUL3 223 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 FAM223AQ8IWN6 122 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 RNF152Q8N8N0 203 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 NECAP1Q8NC96 275 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 SLC24A4Q8NFF2 622 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 OR1L6Q8NGR2 347 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 OR1P1Q8NH06 330 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 FANCD2OSQ96PS1 177 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 THYN1Q9P016 225 aa13.57□□□□□ -0.24
NXF1-216ENST00000533499 IGLV11-55A0A075B6I3 123 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 H3BP45 60 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 L7N2F9 121 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 MBPP02686 304 aaPredicted RBP13.56□□□□□ -0.24
NXF1-216ENST00000533499 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
NXF1-216ENST00000533499 HTR2BP41595 481 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
NXF1-216ENST00000533499 VAMP2P63027 116 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 ID3Q02535 119 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 FCN2Q15485 313 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 DEFB136Q30KP8 78 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 PDLIM3Q53GG5 364 aaPredicted RBP13.56□□□□□ -0.24
NXF1-216ENST00000533499 SPATA3Q8NHX4 192 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 DUX3Q96PT4 197 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 CIB3Q96Q77 187 aaPredicted RBP13.56□□□□□ -0.24
NXF1-216ENST00000533499 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
NXF1-216ENST00000533499 DMRT1Q9Y5R6 373 aa13.56□□□□□ -0.24
NXF1-216ENST00000533499 M0QZ24 198 aa13.55□□□□□ -0.24
NXF1-216ENST00000533499 NPY1RP25929 384 aa13.55□□□□□ -0.24
NXF1-216ENST00000533499 LRRC37A5PQ49AS3 106 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms