RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 CYSRT1A8MQ03 144 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 APELAP0DMC3 54 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 OR13C7P0DN81 318 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 C4BPBP20851 252 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 NPY1RP25929 384 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 HTR2BP41595 481 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 IFITM2Q01629 132 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 OR5C1Q8NGR4 320 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 OR5R1Q8NH85 324 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
TRIM3-213ENST00000533309 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
TRIM3-213ENST00000533309 PRSS46E5RG02 174 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 REG1AP05451 166 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 C16orf82Q7Z2V1 217 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 SSMEM1Q8WWF3 244 aa12.62□□□□□ -0.39
TRIM3-213ENST00000533309 SRSF8Q9BRL6 282 aaKnown RBP12.62□□□□□ -0.39
TRIM3-213ENST00000533309 TAAR5O14804 337 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 EGR2P11161 476 aaPredicted RBP12.61□□□□□ -0.39
TRIM3-213ENST00000533309 CD99P14209 185 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 FOSL1P15407 271 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 HNF1AP20823 631 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 RPP30P78346 268 aaKnown RBP12.61□□□□□ -0.39
TRIM3-213ENST00000533309 ERHP84090 104 aaKnown RBP12.61□□□□□ -0.39
TRIM3-213ENST00000533309 CLINT1Q14677 625 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 ASPHD1Q5U4P2 390 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 RPL7L1Q6DKI1 246 aaKnown RBP12.61□□□□□ -0.39
TRIM3-213ENST00000533309 SIGLECL1Q8N7X8 197 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 P2RX4Q99571 388 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 ZNF471Q9BX82 626 aaPredicted RBP12.61□□□□□ -0.39
TRIM3-213ENST00000533309 VPREB3Q9UKI3 123 aa12.61□□□□□ -0.39
TRIM3-213ENST00000533309 M0QZK8 103 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
TRIM3-213ENST00000533309 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 SNCAP37840 140 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 C19orf35Q6ZS72 473 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 HSD17B13Q7Z5P4 300 aaPredicted RBP12.6□□□□□ -0.39
TRIM3-213ENST00000533309 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 NF1P21359 2839 aa12.6□□□□□ -0.39
TRIM3-213ENST00000533309 LINC01548A6NM66 108 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 MFAP2P55001 183 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 ATP5IP56385 69 aaPredicted RBP12.59□□□□□ -0.39
TRIM3-213ENST00000533309 HBG1P69891 147 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 HBG2P69892 147 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 PVRIGQ6DKI7 326 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
TRIM3-213ENST00000533309 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 FN1P02751 2386 aaKnown RBP12.59□□□□□ -0.39
TRIM3-213ENST00000533309 BTBD17A6NE02 478 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 ATP6V0E1O15342 81 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 CFDP00746 253 aaPredicted RBP12.59□□□□□ -0.39
TRIM3-213ENST00000533309 RAB11AP62491 216 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 ABHD5Q8WTS1 349 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 ST8SIA2Q92186 375 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 ATP5SQ99766 215 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 DMRT1Q9Y5R6 373 aa12.59□□□□□ -0.39
TRIM3-213ENST00000533309 CUBNO60494 3623 aa12.58□□□□□ -0.39
TRIM3-213ENST00000533309 IFNA4P05014 189 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 CTRB1P17538 263 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 BLCAPP62952 87 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 CTRB2Q6GPI1 263 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 PINX1Q96BK5 328 aaKnown RBP12.58□□□□□ -0.4
TRIM3-213ENST00000533309 SLA2Q9H6Q3 261 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 PARP11Q9NR21 331 aa12.58□□□□□ -0.4
TRIM3-213ENST00000533309 F11RQ9Y624 299 aaKnown RBP12.58□□□□□ -0.4
TRIM3-213ENST00000533309 SCAF4O95104 1147 aaKnown RBP12.57□□□□□ -0.4
TRIM3-213ENST00000533309 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
TRIM3-213ENST00000533309 VWC2Q2TAL6 325 aa12.57□□□□□ -0.4
TRIM3-213ENST00000533309 Q6ZS46 218 aa12.57□□□□□ -0.4
TRIM3-213ENST00000533309 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
TRIM3-213ENST00000533309 UBAC2Q8NBM4 344 aa12.57□□□□□ -0.4
TRIM3-213ENST00000533309 LFNGQ8NES3 379 aa12.57□□□□□ -0.4
TRIM3-213ENST00000533309 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
TRIM3-213ENST00000533309 NPIPB5A8MRT5 1133 aa12.56□□□□□ -0.4
TRIM3-213ENST00000533309 JTBO76095 146 aa12.56□□□□□ -0.4
TRIM3-213ENST00000533309 IGHG2P01859 326 aa12.56□□□□□ -0.4
TRIM3-213ENST00000533309 CRYGCP07315 174 aa12.56□□□□□ -0.4
TRIM3-213ENST00000533309 SUB1P53999 127 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM3-213ENST00000533309 TEX261Q6UWH6 196 aa12.56□□□□□ -0.4
TRIM3-213ENST00000533309 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
TRIM3-213ENST00000533309 GSX1Q9H4S2 264 aaPredicted RBP12.56□□□□□ -0.4
TRIM3-213ENST00000533309 FBXO24O75426 580 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 DFFBO76075 338 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 TPT1P13693 172 aaKnown RBP12.55□□□□□ -0.4
TRIM3-213ENST00000533309 CRIP2P52943 208 aaPredicted RBP12.55□□□□□ -0.4
TRIM3-213ENST00000533309 DLK1P80370 383 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 ZNF266Q14584 549 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 ATP6V1FQ16864 119 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 C19orf54Q5BKX5 351 aa12.55□□□□□ -0.4
TRIM3-213ENST00000533309 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
TRIM3-213ENST00000533309 Q71RC1 249 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms