RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 CHEK1O14757 476 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 DFFBO76075 338 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 PPYP01298 95 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 HERV-K104P61576 105 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 RPL11P62913 178 aaKnown RBP8.46□□□□□ -1.06
CMTM1-216ENST00000533078 WT1-ASQ06250 92 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 ZNF124Q15973 351 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 TPRA1Q86W33 373 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 GBGT1Q8N5D6 347 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 BLOC1S6Q9UL45 172 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 APLNQ9ULZ1 77 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 OR51B2Q9Y5P1 312 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 DNAH11Q96DT5 4516 aa8.46□□□□□ -1.06
CMTM1-216ENST00000533078 IGHV3-49A0A0A0MS15 119 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 TEX50A0A1B0GTY4 177 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 TRDV1A0A1B0GX56 115 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 C15orf61A6NNL5 157 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 NOTOA8MTQ0 251 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 MFAP4P55083 255 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 C22orf42Q6IC83 251 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 ZNF773Q6PK81 442 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 TCF24Q7RTU0 167 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 TMEM17Q86X19 198 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 TMEM231Q9H6L2 316 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 NDUFA4L2Q9NRX3 87 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 NDUFB11Q9NX14 153 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 ABCA13Q86UQ4 5058 aa8.45□□□□□ -1.06
CMTM1-216ENST00000533078 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 P0DMU3 169 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 MIFP14174 115 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 TBCEQ15813 527 aaPredicted RBP8.44□□□□□ -1.06
CMTM1-216ENST00000533078 PVRIGQ6DKI7 326 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 DGCR14Q96DF8 476 aaKnown RBP8.44□□□□□ -1.06
CMTM1-216ENST00000533078 MISP3Q96FF7 219 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 OR10C1Q96KK4 312 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 TSC22D3Q99576 134 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 TXN2Q99757 166 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 DAPK2Q9UIK4 370 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 PRNDQ9UKY0 176 aa8.44□□□□□ -1.06
CMTM1-216ENST00000533078 SMIM30A4D0T7 59 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 PRSS29PA6NIE9 313 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 K7EIM0 57 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 SSX5O60225 188 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 GNG7O60262 68 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 CTSGP08311 255 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 HLA-DMBP28068 263 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 S100GP29377 79 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 CBX5P45973 191 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 DEFB131AP59861 70 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 MORN3Q6PF18 240 aaPredicted RBP8.43□□□□□ -1.06
CMTM1-216ENST00000533078 ZNF818PQ6ZRF7 136 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 CMTM1Q8IZ96 169 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 Q8NAQ8 132 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 OR1P1Q8NH06 330 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 SLC25A46Q96AG3 418 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 RNF126Q9BV68 326 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 MS4A6AQ9H2W1 248 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 RHBDL2Q9NX52 303 aa8.43□□□□□ -1.06
CMTM1-216ENST00000533078 IGHV3OR16-13A0A075B7E8 117 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 IGHV3-74A0A0B4J1X5 117 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 ANKRD65E5RJM6 399 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 SCGB2A1O75556 95 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 KRASP01116 189 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 RLN1P04808 185 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 SPP1P10451 314 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 F2RP25116 425 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 LEMD1Q68G75 181 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 Q6ZTC4 211 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 HOGA1Q86XE5 327 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 LGALS14Q8TCE9 139 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 GIMAP1Q8WWP7 306 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 NARS2Q96I59 477 aaKnown RBP8.42□□□□□ -1.06
CMTM1-216ENST00000533078 NXF2Q9GZY0 626 aaKnown RBP8.42□□□□□ -1.06
CMTM1-216ENST00000533078 RABAC1Q9UI14 185 aa8.42□□□□□ -1.06
CMTM1-216ENST00000533078 PKD1P98161 4303 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 MUC4Q99102 2169 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 TRAV18A0A075B6X5 111 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 A0A0A6YYH2 397 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 IGHV4-28A0A0C4DH34 117 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 A0A1W2PS18 150 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 A6NJ64 397 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-216ENST00000533078 PTHLHP12272 177 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 NPBWR1P48145 328 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 SOHLH1Q5JUK2 328 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 CADM3Q8N126 398 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 OR5AP2Q8NGF4 316 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 OR4A16Q8NH70 328 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 PINX1Q96BK5 328 aaKnown RBP8.41□□□□□ -1.06
CMTM1-216ENST00000533078 IFT46Q9NQC8 304 aa8.41□□□□□ -1.06
CMTM1-216ENST00000533078 DIABLOQ9NR28 239 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms