RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 POU2AF1Q16633 256 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
PKP3-209ENST00000533069 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 SULT1A3P0DMM9 295 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 SULT1A4P0DMN0 295 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 AKR1C2P52895 323 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 C10orf55Q5SWW7 151 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 ZNF343Q6P1L6 599 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 SELENOHQ8IZQ5 122 aaKnown RBP12.81□□□□□ -0.36
PKP3-209ENST00000533069 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
PKP3-209ENST00000533069 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
PKP3-209ENST00000533069 MARCH11A6NNE9 402 aa12.8□□□□□ -0.36
PKP3-209ENST00000533069 RPL27AP46776 148 aaKnown RBP12.8□□□□□ -0.36
PKP3-209ENST00000533069 RPL8P62917 257 aaKnown RBP12.8□□□□□ -0.36
PKP3-209ENST00000533069 THOC7Q6I9Y2 204 aaKnown RBP12.8□□□□□ -0.36
PKP3-209ENST00000533069 GSG1LQ6UXU4 331 aa12.8□□□□□ -0.36
PKP3-209ENST00000533069 SLC35G3Q8N808 338 aa12.8□□□□□ -0.36
PKP3-209ENST00000533069 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
PKP3-209ENST00000533069 PEF1Q9UBV8 284 aaKnown RBP12.8□□□□□ -0.36
PKP3-209ENST00000533069 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
PKP3-209ENST00000533069 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 A0A1B0GU03 582 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 ANKRD34BA5PLL1 514 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 NPIPB5A8MRT5 1133 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 S1PR2O95136 353 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 RHOGP84095 191 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 FAM209BQ5JX69 171 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 OR4A47Q6IF82 309 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 NECAP1Q8NC96 275 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 OR4C12Q96R67 309 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 PRR25Q96S07 402 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 B9D2Q9BPU9 175 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 MGAT4CQ9UBM8 478 aa12.79□□□□□ -0.36
PKP3-209ENST00000533069 hCG_2014768A0A024R1R8 64 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 GOSR2O14653 212 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
PKP3-209ENST00000533069 CD69Q07108 199 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 FCN2Q15485 313 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 NMSQ5H8A3 153 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 GGNBP1Q5YKI7 109 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 H2BFWTQ7Z2G1 175 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 LYZL2Q7Z4W2 148 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 DMBX1Q8NFW5 382 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 LHFPL5Q8TAF8 219 aa12.78□□□□□ -0.36
PKP3-209ENST00000533069 FYTTD1Q96QD9 318 aaKnown RBP12.78□□□□□ -0.36
PKP3-209ENST00000533069 LSM4Q9Y4Z0 139 aaKnown RBP12.78□□□□□ -0.36
PKP3-209ENST00000533069 A0A1B0GVG6 124 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 C5orf51A6NDU8 294 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 LY86O95711 162 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 KRASP01116 189 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 IGKV1-39P01597 117 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 IGKV1D-39P04432 117 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 IL6RP08887 468 aaPredicted RBP12.77□□□□□ -0.37
PKP3-209ENST00000533069 HOXB5P09067 269 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 RAP2BP61225 183 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 DEFA5Q01523 94 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 ATP5G2Q06055 141 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 FGL1Q08830 312 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 EXOSC2Q13868 293 aaKnown RBP12.77□□□□□ -0.37
PKP3-209ENST00000533069 KLF5Q13887 457 aaPredicted RBP12.77□□□□□ -0.37
PKP3-209ENST00000533069 AKAP14Q86UN6 197 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 C2orf50Q96LR7 162 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 NMES1Q9C002 83 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.37
PKP3-209ENST00000533069 FKBP11Q9NYL4 201 aa12.77□□□□□ -0.37
PKP3-209ENST00000533069 RBMXL2O75526 392 aaKnown RBP12.76□□□□□ -0.37
PKP3-209ENST00000533069 PRH1P02810 166 aa12.76□□□□□ -0.37
PKP3-209ENST00000533069 CRYGCP07315 174 aa12.76□□□□□ -0.37
PKP3-209ENST00000533069 PET100P0DJ07 73 aa12.76□□□□□ -0.37
PKP3-209ENST00000533069 SMCO1Q147U7 214 aa12.76□□□□□ -0.37
PKP3-209ENST00000533069 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
PKP3-209ENST00000533069 COMMD5Q9GZQ3 224 aa12.76□□□□□ -0.37
PKP3-209ENST00000533069 TMEM140Q9NV12 185 aa12.76□□□□□ -0.37
PKP3-209ENST00000533069 A0A1B0GW64 132 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 FAM90A26D6RGX4 464 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 E7EUB6 86 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 UPK2O00526 184 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 ADAP1O75689 374 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 CCNKO75909 580 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 SNAPC5O75971 98 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 P0C879 139 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 PSMB6P28072 239 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 G6PCP35575 357 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 IAH1Q2TAA2 248 aaPredicted RBP12.75□□□□□ -0.37
PKP3-209ENST00000533069 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 OR11H7Q8NGC8 314 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 OR9G4Q8NGQ1 327 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms