RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 LINC00854A0A1B0GVQ3 168 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 PPP5D1E7EU14 171 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 IGHV3-23P01764 117 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 CTSDP07339 412 aaPredicted RBP11.74□□□□□ -0.53
CPSF1-210ENST00000532935 OR13C7P0DN81 318 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 H2BFWTQ7Z2G1 175 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 OR5B3Q8NH48 314 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 LSM10Q969L4 123 aaKnown RBP11.74□□□□□ -0.53
CPSF1-210ENST00000532935 EEF1AKMT3Q96AZ1 226 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 DMRT1Q9Y5R6 373 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 S4R3C0 116 aa11.74□□□□□ -0.53
CPSF1-210ENST00000532935 PFDN1O60925 122 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 SPNP16150 400 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 SURF2Q15527 256 aaPredicted RBP11.73□□□□□ -0.53
CPSF1-210ENST00000532935 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 HAPLN4Q86UW8 402 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 OR4A16Q8NH70 328 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 CXorf58Q96LI9 332 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 CCDC140Q96MF4 163 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 PRRT1Q99946 306 aa11.73□□□□□ -0.53
CPSF1-210ENST00000532935 C14orf166Q9Y224 244 aaKnown RBP11.73□□□□□ -0.53
CPSF1-210ENST00000532935 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
CPSF1-210ENST00000532935 MFSD2BA6NFX1 497 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 CYB5BO43169 146 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
CPSF1-210ENST00000532935 IGLV1-51P01701 117 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 MECP2P51608 486 aaKnown RBP11.72□□□□□ -0.53
CPSF1-210ENST00000532935 SP6Q3SY56 376 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 TMEM56Q96MV1 263 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 B9D2Q9BPU9 175 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 RTBDNQ9BSG5 229 aaPredicted RBP11.72□□□□□ -0.53
CPSF1-210ENST00000532935 SLC2A8Q9NY64 477 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 THYN1Q9P016 225 aa11.72□□□□□ -0.53
CPSF1-210ENST00000532935 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 B3GALNT1O75752 331 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 ATG12O94817 140 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 IGKV1-5P01602 117 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 HLA-AP01891 365 aaKnown RBP11.71□□□□□ -0.53
CPSF1-210ENST00000532935 CSN3P07498 182 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 P0C879 139 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 GP9P14770 177 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 UCP1P25874 307 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 BTCP35070 178 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 ARL3P36405 182 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 C5orf66Q9H5L9 145 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 PEMTQ9UBM1 199 aa11.71□□□□□ -0.53
CPSF1-210ENST00000532935 F11RQ9Y624 299 aaKnown RBP11.71□□□□□ -0.53
CPSF1-210ENST00000532935 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 OR2C1O95371 312 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 TCRBP04435 133 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 AKR1C2P52895 323 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 MFAP2P55001 183 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 CD69Q07108 199 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 SLC25A24Q6NUK1 477 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 ZNF502Q8TBZ5 544 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 MCUBQ9NWR8 336 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 SIGLEC8Q9NYZ4 499 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 SCP2D1Q9UJQ7 156 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
CPSF1-210ENST00000532935 TEX13DA0A0J9YY54 714 aaPredicted RBP11.69□□□□□ -0.54
CPSF1-210ENST00000532935 INMT-MINDY4F8WBC2 141 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 CLEC3BP05452 202 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 OR5AC1P0C628 307 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
CPSF1-210ENST00000532935 PRCDQ00LT1 54 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 GPHB5Q86YW7 130 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 TMEM222Q9H0R3 208 aa11.69□□□□□ -0.54
CPSF1-210ENST00000532935 A0A0B4J293 547 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 CRYM-AS1A6NIL9 109 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 LGALS9O00182 355 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 PRAF2O60831 178 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 GPR183P32249 361 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 RBMS2Q15434 407 aaKnown RBP11.68□□□□□ -0.54
CPSF1-210ENST00000532935 OR2C3Q8N628 320 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 OR1L6Q8NGR2 347 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
CPSF1-210ENST00000532935 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 SLC25A21Q9BQT8 299 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-210ENST00000532935 PLEKHA3Q9HB20 300 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
CPSF1-210ENST00000532935 NDUFB6O95139 128 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 CDS2O95674 445 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 H2AFB2P0C5Z0 115 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 DHODHQ02127 395 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 ADAMTSL5Q6ZMM2 481 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
CPSF1-210ENST00000532935 LHFPL5Q8TAF8 219 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
CPSF1-210ENST00000532935 HUWE1Q7Z6Z7 4374 aaKnown RBP11.66□□□□□ -0.54
CPSF1-210ENST00000532935 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms