RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.29	□□□□□ -0.28
CTSB-223	ENST00000532370	IGHV3-21	A0A0B4J1V1	117 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	CRYM-AS1	A6NIL9	109 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	LY86	O95711	162 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	CLEC3B	P05452	202 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	MECP2	P51608	486 aa	Known RBP	13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	HSPE1	P61604	102 aa	Known RBP	13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	TOMM5	Q8N4H5	51 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	TMEM56	Q96MV1	263 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	SRR	Q9GZT4	340 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	PRR13	Q9NZ81	148 aa		13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	F11R	Q9Y624	299 aa	Known RBP	13.28	□□□□□ -0.28
CTSB-223	ENST00000532370	CDS2	O95674	445 aa		13.27	□□□□□ -0.29
CTSB-223	ENST00000532370	CSN3	P07498	182 aa		13.27	□□□□□ -0.29
CTSB-223	ENST00000532370	ARL3	P36405	182 aa		13.27	□□□□□ -0.29
CTSB-223	ENST00000532370	TATDN3	Q17R31	274 aa		13.27	□□□□□ -0.29
CTSB-223	ENST00000532370		Q6ZRM9	215 aa		13.27	□□□□□ -0.29
CTSB-223	ENST00000532370	SELENOH	Q8IZQ5	122 aa	Known RBP	13.27	□□□□□ -0.29
CTSB-223	ENST00000532370	ZNF502	Q8TBZ5	544 aa		13.27	□□□□□ -0.29
CTSB-223	ENST00000532370	TRBV7-1	A0A0A6YYK4	115 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	ST8SIA3	O43173	380 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	GGCT	O75223	188 aa	Known RBP	13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	B3GALNT1	O75752	331 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	IGLV1-51	P01701	117 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	EDN2	P20800	178 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	AP3S2	P59780	193 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	PRCD	Q00LT1	54 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	BAK1	Q16611	211 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	ADAMTSL5	Q6ZMM2	481 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	OR2C3	Q8N628	320 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	RRNAD1	Q96FB5	475 aa	Known RBP	13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	CXorf58	Q96LI9	332 aa		13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	LSM4	Q9Y4Z0	139 aa	Known RBP	13.26	□□□□□ -0.29
CTSB-223	ENST00000532370	ATG12	O94817	140 aa		13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	AKR1C4	P17516	323 aa		13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	GPR183	P32249	361 aa		13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	FAM209B	Q5JX69	171 aa		13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	RNASE11	Q8TAA1	199 aa	Known RBP	13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	SCGB3A2	Q96PL1	93 aa		13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	SDHC	Q99643	169 aa	Predicted RBP	13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	THYN1	Q9P016	225 aa		13.25	□□□□□ -0.29
CTSB-223	ENST00000532370	IGHV3-35	A0A0C4DH35	117 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370		K7EIM0	57 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	IFNA17	P01571	189 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	FAU	P35544	74 aa	Known RBP	13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	SUPT4H1	P63272	117 aa	Known RBP	13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	DHODH	Q02127	395 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	TMEM187	Q14656	261 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	TMEM268	Q5VZI3	342 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	ZNF57	Q68EA5	555 aa	Predicted RBP	13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	SGPP2	Q8IWX5	399 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	OR1P1	Q8NH06	330 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	VN1R17P	Q8TDU5	208 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	RBPMS	Q93062	196 aa	Known RBP	13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	PLEKHA3	Q9HB20	300 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	TMEM56-RWDD3	S4R434	201 aa		13.24	□□□□□ -0.29
CTSB-223	ENST00000532370	OR2T8	A6NH00	312 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	CYB5B	O43169	146 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	GP9	P14770	177 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	TMED4	Q7Z7H5	227 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	GPHB5	Q86YW7	130 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	SCARB1	Q8WTV0	552 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	GPR146	Q96CH1	333 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	GALNT14	Q96FL9	552 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	PEMT	Q9UBM1	199 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	SELENOK	Q9Y6D0	94 aa		13.23	□□□□□ -0.29
CTSB-223	ENST00000532370	ZNF320	A2RRD8	509 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	IZUMO1R	A6ND01	250 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370		F8W735	103 aa	Predicted RBP	13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	IGHV3-48	P01763	117 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	UNQ9165/PRO28630	Q6UXU0	137 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	SLC35G3	Q8N808	338 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	DEDD2	Q8WXF8	326 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	S100Z	Q8WXG8	99 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	MISP3	Q96FF7	219 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	SIGLEC8	Q9NYZ4	499 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	KCNIP3	Q9Y2W7	256 aa		13.22	□□□□□ -0.29
CTSB-223	ENST00000532370	LINC00854	A0A1B0GVQ3	168 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	C2orf70	A6NJV1	201 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370		I3L2K1	104 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	FOLR2	P14207	255 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	ERH	P84090	104 aa	Known RBP	13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	PLET1	Q6UQ28	207 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	FAM219A	Q8IW50	185 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	ZNF114	Q8NC26	417 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	OR1L6	Q8NGR2	347 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	CACNG8	Q8WXS5	425 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	CHRDL1	Q9BU40	450 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	C21orf62	Q9NYP8	219 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	CACNG5	Q9UF02	275 aa		13.21	□□□□□ -0.29
CTSB-223	ENST00000532370	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.21	□□□□□ -0.3
CTSB-223	ENST00000532370	LGALS9	O00182	355 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	TGOLN2	O43493	480 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	HOXA1	P49639	335 aa	Predicted RBP	13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	CCR6	P51684	374 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	FAM106A	Q4KMX7	169 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	AARD	Q4LEZ3	155 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	TM4SF20	Q53R12	229 aa		13.2	□□□□□ -0.3
CTSB-223	ENST00000532370	TRIQK	Q629K1	86 aa		13.2	□□□□□ -0.3

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