RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SLC37A2Q8TED4 501 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 Q8WTZ3 238 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 PATE1Q8WXA2 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BHQ93079 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ABHD14BQ96IU4 210 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BNQ99877 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 HIST1H2BMQ99879 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 FOXC2Q99958 501 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ANGPTL4Q9BY76 406 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 PLA2G2FQ9BZM2 168 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 OR11A1Q9GZK7 315 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 EIF5A2Q9GZV4 153 aaKnown RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 BANF2Q9H503 90 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 NAA60Q9H7X0 242 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 NECAP2Q9NVZ3 263 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TMEM242Q9NWH2 141 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 KCNIP1Q9NZI2 227 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 OR1A1Q9P1Q5 309 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 CBY1Q9Y3M2 126 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 LSM5Q9Y4Y9 91 aaKnown RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 TSSC4Q9Y5U2 329 aaPredicted RBP3.14□□□□□ -1.91
USP47-209ENST00000530041 LHFPL6Q9Y693 200 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 MTCH2Q9Y6C9 303 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 V9GYS6 101 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 ALPK2Q86TB3 2170 aa3.14□□□□□ -1.91
USP47-209ENST00000530041 TMEM131Q92545 1883 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 CACNA1CQ13936 2221 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 FREM3P0C091 2139 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 TRBV24-1A0A075B6N3 115 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 IGHV1OR21-1A0A087WYE8 117 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 A0A1B0GV90 55 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 LOC102725191A0A1B0GVB3 256 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 PSMB11A5LHX3 300 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 OR5H1A6NKK0 313 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 DHRS7CA6NNS2 312 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 C17orf51A8MQB3 221 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 H3BQ15 152 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ITGB1BP1O14713 200 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 BRI3O95415 125 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 CDS2O95674 445 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 SOD3P08294 240 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 P0C879 139 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 RD3LP0DJH9 198 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 OR13C7P0DN81 318 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 CCL5P13501 91 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 FOLR1P15328 257 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 VDAC1P21796 283 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 BLVRBP30043 206 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 DDTP30046 118 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 HOXA6P31267 233 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ZNF133P52736 654 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 UBE2KP61086 200 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 LSM6P62312 80 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 GRB2P62993 217 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 HIST1H3AP68431 136 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 CCL20P78556 96 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ZNF616Q08AN1 781 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 PLCXD2Q0VAA5 305 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 FZD2Q14332 565 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 JOSD1Q15040 202 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 HIST3H3Q16695 136 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ATP6V1FQ16864 119 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 C5orf64Q2M2E5 130 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 CHRFAM7AQ494W8 412 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 C5orf47Q569G3 176 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 KHDC3LQ587J8 217 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 COA6Q5JTJ3 125 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 THEM4Q5T1C6 240 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 Q6ZSR6 202 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ZNF429Q86V71 674 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 LGI3Q8N145 548 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ZNF283Q8N7M2 679 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 OR10AD1Q8NGE0 317 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 OR51T1Q8NGJ9 327 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 RNASE11Q8TAA1 199 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 FAM213BQ8TBF2 198 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 RNASEH2CQ8TDP1 164 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 TMEM234Q8WY98 164 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 TSLPQ969D9 159 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 RPEQ96AT9 228 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 EEF1AKMT3Q96AZ1 226 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 TVP23CQ96ET8 276 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 NOL4LQ96MY1 436 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 SPACA5Q96QH8 159 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ZNF2Q9BSG1 426 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 SRXN1Q9BYN0 137 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 TBL1XR1Q9BZK7 514 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 SMIM3Q9BZL3 60 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 OR8D2Q9GZM6 311 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 SH3BGRL3Q9H299 93 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 TCEAL2Q9H3H9 227 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 UBE2ZQ9H832 354 aaPredicted RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 GPR84Q9NQS5 396 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 SDHAF3Q9NRP4 125 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 ANXA10Q9UJ72 324 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 MCTS1Q9ULC4 181 aaKnown RBP3.13□□□□□ -1.91
USP47-209ENST00000530041 TP53TG5Q9Y2B4 290 aa3.13□□□□□ -1.91
USP47-209ENST00000530041 PUS1Q9Y606 427 aaKnown RBP eCLIP3.13□□□□□ -1.91
USP47-209ENST00000530041 COL5A1P20908 1838 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms