RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SPATA2Q9UM82 520 aa8.26□□□□□ -1.09
AMBRA1-207ENST00000529553 IGHV3-21A0A0B4J1V1 117 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 SMIM9A6NGZ8 99 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 J3QRK9 145 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 UCHL1P09936 223 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 RPL11P62913 178 aaKnown RBP8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 MSMO1Q15800 293 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 RAB11BQ15907 218 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 C10orf67Q8IYJ2 551 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 LILRB2Q8N423 598 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 C15orf53Q8NAA6 179 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 ST8SIA2Q92186 375 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 FAM3DQ96BQ1 224 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 C9orf16Q9BUW7 83 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 TMEM231Q9H6L2 316 aa8.25□□□□□ -1.09
AMBRA1-207ENST00000529553 IGHV3OR16-13A0A075B7E8 117 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 IGHV3-74A0A0B4J1X5 117 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 TRAV3A0A0B4J244 114 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 TEX50A0A1B0GTY4 177 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 K7EQG2 157 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 MFNGO00587 321 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 HPRT1P00492 218 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 NQO2P16083 231 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 GNB3P16520 340 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 BTF3P20290 206 aaKnown RBP8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 DTYMKP23919 212 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 GADD45AP24522 165 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 MFAP4P55083 255 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 RCN1Q15293 331 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 LYPD1Q8N2G4 141 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 NANOGP1Q8N7R0 232 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 ZNF555Q8NEP9 628 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 OR1L8Q8NGR8 309 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 OR10R2Q8NGX6 335 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 DCSTAMPQ9H295 470 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 NDUFA4L2Q9NRX3 87 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 RABAC1Q9UI14 185 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 AGRNO00468 2067 aa8.24□□□□□ -1.09
AMBRA1-207ENST00000529553 IGKV1D-8A0A087WSZ0 117 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 IGKV1D-13A0A0B4J2D9 117 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 KNCNA6PVL3 124 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 MYL12BO14950 172 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 IGKV1-13P0DP09 117 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 HIST1H1DP16402 221 aaKnown RBP8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 NFYAP23511 347 aaPredicted RBP8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 FGF9P31371 208 aaPredicted RBP8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 ACTL10Q5JWF8 245 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 SPAG16Q8N0X2 631 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 ZBTB34Q8NCN2 500 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 ZNRF2Q8NHG8 242 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 GFI1Q99684 422 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 ATG101Q9BSB4 218 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 TAS2R8Q9NYW2 309 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
AMBRA1-207ENST00000529553 A0A1W2PS18 150 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 CASQ2O14958 399 aaPredicted RBP8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 APOHP02749 345 aaPredicted RBP8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 ARL6IP1Q15041 203 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 KCTD21Q4G0X4 260 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 CNIH2Q6PI25 160 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 TOMM20LQ6UXN7 152 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 ZNF705AQ6ZN79 300 aaPredicted RBP8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 CADM3Q8N126 398 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 OR1P1Q8NH06 330 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 FRZBQ92765 325 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 C18orf15Q96N68 181 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 RAB40CQ96S21 281 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 DKK2Q9UBU2 259 aa8.22□□□□□ -1.09
AMBRA1-207ENST00000529553 TMEM272A0A1B0GTI8 110 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 ZNF705FA8MVS1 300 aaPredicted RBP8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 I3L2K1 104 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 ZNF705DP0CH99 300 aaPredicted RBP8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 ZNF705BP0CI00 300 aaPredicted RBP8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 KRTAP10-2P60368 255 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 OGFRL1Q5TC84 451 aaPredicted RBP8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 TMEM88Q6PEY1 159 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 NRG4Q8WWG1 115 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 PLEKHA2Q9HB19 425 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 TMEM140Q9NV12 185 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 AK6Q9Y3D8 172 aaKnown RBP8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 PUS1Q9Y606 427 aaKnown RBP eCLIP8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 RFNGQ9Y644 331 aa8.21□□□□□ -1.1
AMBRA1-207ENST00000529553 GNG7O60262 68 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 NPPCP23582 126 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 GNRHRP30968 328 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 CLDN12P56749 244 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 Q5VSD8 79 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 DMBX1Q8NFW5 382 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 DCANP1Q8TF63 244 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 SLC25A46Q96AG3 418 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 TMEM56Q96MV1 263 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 XCL2Q9UBD3 114 aa8.2□□□□□ -1.1
AMBRA1-207ENST00000529553 A0A075B6Q4 140 aa8.19□□□□□ -1.1
AMBRA1-207ENST00000529553 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
AMBRA1-207ENST00000529553 METTL21EPA6NDL7 271 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms