RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PRAF2O60831 178 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 PITX3O75364 302 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 BRI3O95415 125 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 DHFRP00374 187 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 IFNA21P01568 189 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 SLC25A6P12236 298 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
USF1-209ENST00000529476 HOXA1P49639 335 aaPredicted RBP10.88□□□□□ -0.67
USF1-209ENST00000529476 RGS21Q2M5E4 152 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 OR2C3Q8N628 320 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 OR52E5Q8NH55 327 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 FANCD2OSQ96PS1 177 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 OR5B12Q96R08 314 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 GNB4Q9HAV0 340 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 DMRT1Q9Y5R6 373 aa10.88□□□□□ -0.67
USF1-209ENST00000529476 TRBV9A0A0B4J1U6 114 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 NUDT19A8MXV4 375 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 CCSO14618 274 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 OR2J3O76001 311 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 DEFA4P12838 97 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 RHOGP84095 191 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 TNFRSF9Q07011 255 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 C8orf86Q6ZUL3 223 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 MRPL41Q8IXM3 137 aaKnown RBP10.87□□□□□ -0.67
USF1-209ENST00000529476 UBE2E2Q96LR5 201 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 ENY2Q9NPA8 101 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
USF1-209ENST00000529476 TRRAPQ9Y4A5 3859 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 IGLV11-55A0A075B6I3 123 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 CEBPZOSA8MTT3 80 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 SNRPGP15A8MWD9 76 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 INS-IGF2F8WCM5 200 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 M0QZ24 198 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 TSPAN15O95858 294 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 MFAP2P55001 183 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
USF1-209ENST00000529476 C2orf68Q2NKX9 166 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 C4orf3Q8WVX3 66 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 OR10C1Q96KK4 312 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 P2RX4Q99571 388 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 RBKSQ9H477 322 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 FBXL7Q9UJT9 491 aa10.86□□□□□ -0.67
USF1-209ENST00000529476 F11RQ9Y624 299 aaKnown RBP10.86□□□□□ -0.67
USF1-209ENST00000529476 C13orf42A0A1B0GVH6 325 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 FAM223BA6NKX1 122 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 FAM25EA8MYX2 175 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 NDUFB8O95169 186 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 HIST1H1BP16401 226 aaKnown RBP10.85□□□□□ -0.67
USF1-209ENST00000529476 TATDN3Q17R31 274 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 IAH1Q2TAA2 248 aaPredicted RBP10.85□□□□□ -0.67
USF1-209ENST00000529476 KLK9Q2XQG4 91 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 DEFB136Q30KP8 78 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 SLC25A24Q6NUK1 477 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 FAM223AQ8IWN6 122 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 NECAP1Q8NC96 275 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 USMG5Q96IX5 58 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 KLK9Q9UKQ9 250 aa10.85□□□□□ -0.67
USF1-209ENST00000529476 PRKDCP78527 4128 aaKnown RBP10.85□□□□□ -0.67
USF1-209ENST00000529476 A0A0G2JLM5 398 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 I3L521 148 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
USF1-209ENST00000529476 SNCAP37840 140 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 OXA1LQ15070 435 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 ZBTB8BQ8NAP8 495 aaPredicted RBP10.84□□□□□ -0.67
USF1-209ENST00000529476 ZNF114Q8NC26 417 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 OR1P1Q8NH06 330 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 DTD1Q8TEA8 209 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 RAX2Q96IS3 184 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 DUX3Q96PT4 197 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 MAGT1Q9H0U3 335 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 HEYLQ9NQ87 328 aaPredicted RBP10.84□□□□□ -0.67
USF1-209ENST00000529476 GSKIPQ9P0R6 139 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 ALG5Q9Y673 324 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 S4R3C0 116 aa10.84□□□□□ -0.67
USF1-209ENST00000529476 C7orf66A4D0T2 115 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 C5orf51A6NDU8 294 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 FAM90A26D6RGX4 464 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 RNASE2P10153 161 aaKnown RBP10.83□□□□□ -0.68
USF1-209ENST00000529476 RUNX1Q01196 453 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 EXOSC2Q13868 293 aaKnown RBP10.83□□□□□ -0.68
USF1-209ENST00000529476 BSXQ3C1V8 233 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 ETV3LQ6ZN32 361 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 OR4F17Q8NGA8 305 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 OR4F4Q96R69 305 aa10.83□□□□□ -0.68
USF1-209ENST00000529476 IGHV3-21A0A0B4J1V1 117 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 ANKRD34BA5PLL1 514 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 MFSD2BA6NFX1 497 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 GOSR2O14653 212 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 CYB5BO43169 146 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 SSNA1O43805 119 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 SCGB1D2O95969 90 aa10.82□□□□□ -0.68
USF1-209ENST00000529476 IAPPP10997 89 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms