RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SNX29P2Q8IUI4 249 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 ZNF486Q96H40 463 aaPredicted RBP7.87□□□□□ -1.15
CPSF1-203ENST00000527916 ZNF436Q9C0F3 470 aaPredicted RBP7.87□□□□□ -1.15
CPSF1-203ENST00000527916 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
CPSF1-203ENST00000527916 OR51B2Q9Y5P1 312 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 F11RQ9Y624 299 aaKnown RBP7.87□□□□□ -1.15
CPSF1-203ENST00000527916 S4R3C0 116 aa7.87□□□□□ -1.15
CPSF1-203ENST00000527916 A0A0J9YWU9 116 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 ZNF320A2RRD8 509 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 SMIM18P0DKX4 95 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 RPA2P15927 270 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 TBPP20226 339 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 GPR183P32249 361 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 RND3P61587 244 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 TNFRSF9Q07011 255 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 GUCA2BQ16661 112 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 ANKRD55Q3KP44 614 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 PHLDA2Q53GA4 152 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 SLC16A13Q7RTY0 426 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 TBC1D26Q86UD7 250 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 LHFPL1Q86WI0 220 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 ARRDC1Q8N5I2 433 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 UXS1Q8NBZ7 420 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 SEC22AQ96IW7 307 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 OVOL2Q9BRP0 275 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 GGTLC1Q9BX51 225 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 NAA50Q9GZZ1 169 aaKnown RBP7.86□□□□□ -1.15
CPSF1-203ENST00000527916 UFC1Q9Y3C8 167 aa7.86□□□□□ -1.15
CPSF1-203ENST00000527916 C15orf61A6NNL5 157 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 FAM25AB3EWG3 89 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 FAM25CB3EWG5 89 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 FAM25GB3EWG6 89 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 TGOLN2O43493 480 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 MED14OSP0DP75 135 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
CPSF1-203ENST00000527916 EDN2P20800 178 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 ALDH3B2P48448 385 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 MFAP2P55001 183 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 GPR107Q5VW38 600 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 UNQ9165/PRO28630Q6UXU0 137 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 H2BFWTQ7Z2G1 175 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 TMEM61Q8N0U2 210 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 TMEM217Q8N7C4 229 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 OR1P1Q8NH06 330 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 SCARB1Q8WTV0 552 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 WDR89Q96FK6 387 aaPredicted RBP7.85□□□□□ -1.15
CPSF1-203ENST00000527916 BSCL2Q96G97 398 aaPredicted RBP7.85□□□□□ -1.15
CPSF1-203ENST00000527916 ABHD1Q96SE0 405 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 WFDC10AQ9H1F0 79 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 C21orf62Q9NYP8 219 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 KLK11Q9UBX7 282 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 MTFP1Q9UDX5 166 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 MLXQ9UH92 298 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 NSG2Q9Y328 171 aa7.85□□□□□ -1.15
CPSF1-203ENST00000527916 DNAH6Q9C0G6 4158 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 LOC102724200A0A096LPH7 203 aaPredicted RBP7.84□□□□□ -1.15
CPSF1-203ENST00000527916 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 K7EIM0 57 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 K7EMT4 169 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 NDUFA4O00483 81 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 IGKV1-39P01597 117 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 IGKV1D-39P04432 117 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 FCGR2BP31994 310 aaPredicted RBP7.84□□□□□ -1.15
CPSF1-203ENST00000527916 BMI1P35226 326 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
CPSF1-203ENST00000527916 SSBP1Q04837 148 aaKnown RBP7.84□□□□□ -1.15
CPSF1-203ENST00000527916 TM4SF20Q53R12 229 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 RNASE10Q5GAN6 216 aaKnown RBP7.84□□□□□ -1.15
CPSF1-203ENST00000527916 LYG2Q86SG7 212 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 TMEM229BQ8NBD8 167 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 OR52I2Q8NH67 350 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 OR4A16Q8NH70 328 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 CACNG8Q8WXS5 425 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 TXN2Q99757 166 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 HINT2Q9BX68 163 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 MRPS26Q9BYN8 205 aaKnown RBP7.84□□□□□ -1.15
CPSF1-203ENST00000527916 C5orf66Q9H5L9 145 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 EXTL2Q9UBQ6 330 aa7.84□□□□□ -1.15
CPSF1-203ENST00000527916 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
CPSF1-203ENST00000527916 INS-IGF2F8WCM5 200 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 GABARAPH6UMI1 98 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 M0QYG6 137 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 B3GALNT1O75752 331 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 ATG12O94817 140 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 CD74P04233 296 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 CD3DP04234 171 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 MRPS10P82664 201 aaKnown RBP7.83□□□□□ -1.16
CPSF1-203ENST00000527916 PRCDQ00LT1 54 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 BTNL8Q6UX41 500 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 RBPMS2Q6ZRY4 209 aaKnown RBP7.83□□□□□ -1.16
CPSF1-203ENST00000527916 GPR141Q7Z602 305 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 WFDC3Q8IUB2 231 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 OR2C3Q8N628 320 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 ZNF114Q8NC26 417 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 OR52B4Q8NGK2 314 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 TERB2Q8NHR7 220 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 ZFAND1Q8TCF1 268 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 TMEM190Q8WZ59 177 aa7.83□□□□□ -1.16
CPSF1-203ENST00000527916 DAZ1Q9NQZ3 744 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms