RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SPINK9Q5DT21 86 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 CCDC71LQ8N9Z2 235 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
CAPN1-213ENST00000527897 SMIM4Q8WVI0 70 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 RCHY1Q96PM5 261 aa11.76□□□□□ -0.53
CAPN1-213ENST00000527897 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 CBLN1P23435 193 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 MEF2DQ14814 521 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 TM4SF20Q53R12 229 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 Q56UQ5 140 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 UNQ9165/PRO28630Q6UXU0 137 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 CADM3Q8N126 398 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 VN1R17PQ8TDU5 208 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 MISP3Q96FF7 219 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 PLEKHA3Q9HB20 300 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
CAPN1-213ENST00000527897 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
CAPN1-213ENST00000527897 TMEM213A2RRL7 107 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 TGOLN2O43493 480 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 AKAIN1P0CW23 69 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 SSBP1Q04837 148 aaKnown RBP11.74□□□□□ -0.53
CAPN1-213ENST00000527897 UXS1Q8NBZ7 420 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 OR4C16Q8NGL9 310 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 MCFD2Q8NI22 146 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 WDR89Q96FK6 387 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-213ENST00000527897 NEURL2Q9BR09 285 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 SLIRPQ9GZT3 109 aaKnown RBP11.74□□□□□ -0.53
CAPN1-213ENST00000527897 PALMDQ9NP74 551 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 SLC2A8Q9NY64 477 aa11.74□□□□□ -0.53
CAPN1-213ENST00000527897 TECRQ9NZ01 308 aaKnown RBP11.74□□□□□ -0.53
CAPN1-213ENST00000527897 TEX13DA0A0J9YY54 714 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-213ENST00000527897 ATG12O94817 140 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 IFNA17P01571 189 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 CD7P09564 240 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
CAPN1-213ENST00000527897 PRCDQ00LT1 54 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 ZNF57Q68EA5 555 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-213ENST00000527897 BTNL8Q6UX41 500 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 OR1L6Q8NGR2 347 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 SCARB1Q8WTV0 552 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
CAPN1-213ENST00000527897 THAP7Q9BT49 309 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-213ENST00000527897 PDCD10Q9BUL8 212 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 C19orf73Q9NVV2 129 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 TENM3Q9P273 2699 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 MLXQ9UH92 298 aa11.73□□□□□ -0.53
CAPN1-213ENST00000527897 IGHV3OR16-8A0A075B7F1 116 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 FABP12A6NFH5 140 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 ZNF785A8K8V0 405 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 A8MWP6 167 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 K7EIM0 57 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 CTDSPLO15194 276 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 TNFSF8P32971 234 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 OR2C3Q8N628 320 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 C20orf24Q9BUV8 137 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 MCUBQ9NWR8 336 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 RABL2AQ9UBK7 228 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 RSL24D1Q9UHA3 163 aaKnown RBP11.72□□□□□ -0.53
CAPN1-213ENST00000527897 RABL2BQ9UNT1 228 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
CAPN1-213ENST00000527897 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
CAPN1-213ENST00000527897 OR5AC1P0C628 307 aa11.71□□□□□ -0.53
CAPN1-213ENST00000527897 TMEM61Q8N0U2 210 aa11.71□□□□□ -0.53
CAPN1-213ENST00000527897 DEFB125Q8N687 156 aa11.71□□□□□ -0.53
CAPN1-213ENST00000527897 OR51S1Q8NGJ8 323 aa11.71□□□□□ -0.53
CAPN1-213ENST00000527897 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
CAPN1-213ENST00000527897 CEPT1Q9Y6K0 416 aa11.71□□□□□ -0.53
CAPN1-213ENST00000527897 STAB2Q8WWQ8 2551 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 A0A0B4J293 547 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 A8MZ25 164 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 ST8SIA3O43173 380 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 UCP1P25874 307 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 SNCAP37840 140 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-213ENST00000527897 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 RBPMS2Q6ZRY4 209 aaKnown RBP11.7□□□□□ -0.54
CAPN1-213ENST00000527897 PRRT1Q99946 306 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-213ENST00000527897 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-213ENST00000527897 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 ENY2Q9NPA8 101 aa11.7□□□□□ -0.54
CAPN1-213ENST00000527897 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
CAPN1-213ENST00000527897 NUPL2O15504 423 aaKnown RBP11.69□□□□□ -0.54
CAPN1-213ENST00000527897 GSTZ1O43708 216 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-213ENST00000527897 YIF1AO95070 293 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms