RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 HLA-GP17693 338 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 PSMB6P28072 239 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 DEFA5Q01523 94 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 DHODHQ02127 395 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 POU2AF1Q16633 256 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 CTRB2Q6GPI1 263 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 AKAP14Q86UN6 197 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 GPHB5Q86YW7 130 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 ASB13Q8WXK3 278 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 TUBA4BQ9H853 241 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 TECRQ9NZ01 308 aaKnown RBP10.78□□□□□ -0.68
CAPN1-212ENST00000527887 TNCP24821 2201 aa10.78□□□□□ -0.68
CAPN1-212ENST00000527887 A0A0B4J2A0 478 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 CYB5BO43169 146 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 THOC7Q6I9Y2 204 aaKnown RBP10.77□□□□□ -0.69
CAPN1-212ENST00000527887 SLC38A6Q8IZM9 456 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 MARCH1Q8TCQ1 289 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 ZNF431Q8TF32 576 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-212ENST00000527887 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 CXorf58Q96LI9 332 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 FANCD2OSQ96PS1 177 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 SPATA25Q9BR10 227 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 MED28Q9H204 178 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 SHPKQ9UHJ6 478 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 DMRT1Q9Y5R6 373 aa10.77□□□□□ -0.69
CAPN1-212ENST00000527887 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 PIGBOS1A0A0B4J2F0 54 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 E7EUB6 86 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 TNFSF12O43508 249 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 DEFA4P12838 97 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 LYL1P12980 280 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
CAPN1-212ENST00000527887 HERV-K104P61576 105 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 FAM106AQ4KMX7 169 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 CASC10Q5T4H9 136 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 OR4A47Q6IF82 309 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 SSX9Q7RTT3 188 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 RTBDNQ9BSG5 229 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-212ENST00000527887 THYN1Q9P016 225 aa10.76□□□□□ -0.69
CAPN1-212ENST00000527887 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
CAPN1-212ENST00000527887 A0A1B0GW64 132 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 B3GALNT1O75752 331 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 CCNKO75909 580 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 SULT1A3P0DMM9 295 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 SULT1A4P0DMN0 295 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 RND3P61587 244 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 C4orf46Q504U0 113 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 HSD17B13Q7Z5P4 300 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-212ENST00000527887 LYG2Q86SG7 212 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 MITD1Q8WV92 249 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 COMMD5Q9GZQ3 224 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 C5orf66Q9H5L9 145 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
CAPN1-212ENST00000527887 IGLV11-55A0A075B6I3 123 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 C9orf170A2RU37 121 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 C2orf70A6NJV1 201 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 UPK2O00526 184 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 NDUFB8O95169 186 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 OR2C1O95371 312 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 FOLR2P14207 255 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 PGAM2P15259 253 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 AREGP15514 252 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 S100GP29377 79 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 GNRHRP30968 328 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 ARL3P36405 182 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 FXYD4P59646 89 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 OR2B8PP59922 312 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 DHRS2Q13268 280 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 HAGHQ16775 308 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 CD300EQ496F6 205 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-212ENST00000527887 ADAMTSL5Q6ZMM2 481 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 ZNF818PQ6ZRF7 136 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 TMED4Q7Z7H5 227 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 CMTM1Q8IZ96 169 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 TCTE3Q8IZS6 198 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 CCDC71LQ8N9Z2 235 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 GALNT14Q96FL9 552 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 GPHA2Q96T91 129 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 KCNIP3Q9Y2W7 256 aa10.74□□□□□ -0.69
CAPN1-212ENST00000527887 IZUMO1RA6ND01 250 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 CRYM-AS1A6NIL9 109 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 ZNF785A8K8V0 405 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 PPP5D1E7EU14 171 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 SSNA1O43805 119 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 F2RP25116 425 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 ERVK-16P61578 105 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 CLEC19AQ6UXS0 136 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 C12orf45Q8N5I9 185 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-212ENST00000527887 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 ST6GAL2Q96JF0 529 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
CAPN1-212ENST00000527887 EDA2RQ9HAV5 297 aa10.73□□□□□ -0.69
CAPN1-212ENST00000527887 CGB1A6NKQ9 187 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 A8MWP6 167 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 SNAPC5O75971 98 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms