RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 IGLV1-47P01700 117 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 PRRX1P54821 245 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 ACOT6Q3I5F7 207 aaPredicted RBP13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 SLC16A13Q7RTY0 426 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 OR5B3Q8NH48 314 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 GATAD1Q8WUU5 269 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 MGST2Q99735 147 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 PCGF1Q9BSM1 259 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 CTDSP1Q9GZU7 261 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 CHODLQ9H9P2 273 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
PCDHA6-202ENST00000527624 NDUFS6O75380 124 aaKnown RBP13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 IGLV2-23P01705 113 aa13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 S100A12P80511 92 aa13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 C10orf55Q5SWW7 151 aa13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 C8orf46Q8TAG6 207 aa13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 SPTAN1Q13813 2472 aaKnown RBP13.97□□□□□ -0.17
PCDHA6-202ENST00000527624 E7EUB6 86 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 SLC25A17O43808 307 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 LIPFP07098 398 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 HOXA5P20719 270 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 PNKDQ8N490 385 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 NANPQ8TBE9 248 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 TNFRSF14Q92956 283 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 FAM210BQ96KR6 192 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 TPSG1Q9NRR2 321 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 BUB1B-PAK6H3BSN5 160 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 CLN5O75503 358 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 MC5RP33032 325 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 CDC34P49427 236 aaPredicted RBP13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 ARF6P62330 175 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 RPUSD4Q96CM3 377 aaKnown RBP13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 C1orf159Q96HA4 380 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 SSX3Q99909 188 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 DOK5Q9P104 306 aa13.96□□□□□ -0.17
PCDHA6-202ENST00000527624 AKAP6Q13023 2319 aa13.96□□□□□ -0.18
PCDHA6-202ENST00000527624 SEC14L6B5MCN3 397 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 MPDU1O75352 247 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 TRGC2P03986 189 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 USF1P22415 310 aaPredicted RBP13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 ADIRFQ15847 76 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 MIC13Q5XKP0 118 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 LY6G5BQ8NDX9 201 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 OR4F5Q8NH21 305 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 VSTM2AQ8TAG5 236 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 TMEM167AQ8TBQ9 72 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 OR4F4Q96R69 305 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 GGTLC1Q9BX51 225 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 PARLQ9H300 379 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 ZNF430Q9H8G1 570 aaPredicted RBP13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 PATZ1Q9HBE1 687 aaKnown RBP13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 NDUFA4L2Q9NRX3 87 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 PAGE4O60829 102 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 RBP4P02753 201 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 MOB3BQ86TA1 216 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 OR4P4Q8NGL7 312 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 NPVFQ9HCQ7 196 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 INSIG2Q9Y5U4 225 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 ARHGAP32A7KAX9 2087 aa13.95□□□□□ -0.18
PCDHA6-202ENST00000527624 TRBV24-1A0A075B6N3 115 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 SOX15O60248 233 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BKO60814 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 YIF1AO95070 293 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BJP06899 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BOP23527 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BBP33778 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 NDUFA6P56556 154 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BDP58876 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BCP62807 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST2H2BEQ16778 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 BEND2Q8NDZ0 799 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 OR1L8Q8NGR8 309 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BHQ93079 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BNQ99877 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 HIST1H2BMQ99879 126 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 LSM4Q9Y4Z0 139 aaKnown RBP13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 PXMP4Q9Y6I8 212 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 IGHV1-3A0A0C4DH29 117 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 OPRK1P41145 380 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 CDX1P47902 265 aaPredicted RBP13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 RPL23P62829 140 aaKnown RBP13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 TMEM249Q2WGJ8 235 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 BSXQ3C1V8 233 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 VMA21Q3ZAQ7 101 aa13.94□□□□□ -0.18
PCDHA6-202ENST00000527624 LOC105371242A0A075B767 164 aa13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 RNASE2P10153 161 aaKnown RBP13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 CNTFRP26992 372 aa13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 GPR6P46095 362 aaPredicted RBP13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 TEPPQ6URK8 271 aa13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 OR4A5Q8NH83 315 aa13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 RPEQ96AT9 228 aa13.93□□□□□ -0.18
PCDHA6-202ENST00000527624 CGB1A6NKQ9 187 aa13.92□□□□□ -0.18
PCDHA6-202ENST00000527624 TGOLN2O43493 480 aa13.92□□□□□ -0.18
PCDHA6-202ENST00000527624 MLANAQ16655 118 aa13.92□□□□□ -0.18
PCDHA6-202ENST00000527624 C2orf83Q53S99 150 aa13.92□□□□□ -0.18
PCDHA6-202ENST00000527624 LDLRAD2Q5SZI1 272 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms