RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 CITED1Q99966 193 aa10.05□□□□□ -0.8
SSSCA1-203ENST00000526877 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
SSSCA1-203ENST00000526877 A0A0D9SG52 128 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 M0QZK8 103 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 FCN1O00602 326 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 FGF16O43320 207 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 TSC22D2O75157 780 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 MYOD1P15172 320 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 AP2S1P53680 142 aaPredicted RBP10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 PAX9P55771 341 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 PROK1P58294 105 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 ERHP84090 104 aaKnown RBP10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 OR2F1Q13607 317 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 TMEM219Q86XT9 240 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 AQP10Q96PS8 301 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 VPREB3Q9UKI3 123 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 STRAPQ9Y3F4 350 aaKnown RBP10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 PLXNB1O43157 2135 aa10.04□□□□□ -0.8
SSSCA1-203ENST00000526877 FAM24AA6NFZ4 105 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 TSPAN9O75954 239 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 TMEM50AO95807 157 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 HLA-DRB1P01911 266 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 VDAC2P45880 294 aaPredicted RBP10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 ZNF345Q14585 488 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 FXYD3Q14802 87 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 LGALSLQ3ZCW2 172 aaPredicted RBP10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 SPANXN5Q5MJ07 72 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 HSD17B13Q7Z5P4 300 aaPredicted RBP10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 C9orf62Q8N4C0 152 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 C5orf56Q8N8D9 126 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 SRSF12Q8WXF0 261 aaKnown RBP10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 SRSF8Q9BRL6 282 aaKnown RBP10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 HSPB11Q9Y547 144 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 U3KQ87 197 aa10.03□□□□□ -0.8
SSSCA1-203ENST00000526877 INS-IGF2F8WCM5 200 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 H3BP45 60 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 KCNAB3O43448 404 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 SCAF4O95104 1147 aaKnown RBP10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 IFNA10P01566 189 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 CXCL2P19875 107 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 SNCAP37840 140 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 ATP5IP56385 69 aaPredicted RBP10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 CX3CL1P78423 397 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 TMUB2Q71RG4 321 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 STX12Q86Y82 276 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 KCNRGQ8N5I3 272 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 TMEM252Q8N6L7 170 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 ABHD5Q8WTS1 349 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 PAIP2BQ9ULR5 123 aaKnown RBP10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
SSSCA1-203ENST00000526877 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 E7EUB6 86 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 S100A11P31949 105 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 HTR2BP41595 481 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 RAB11AP62491 216 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 EWSR1Q01844 656 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 BAXQ07812 192 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 LAMTOR1Q6IAA8 161 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 OR10W1Q8NGF6 305 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 ARL6Q9H0F7 186 aa10.01□□□□□ -0.81
SSSCA1-203ENST00000526877 IGHV7-81A0A0B4J1V7 117 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 IGSF23A1L1A6 192 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 TAAR5O14804 337 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 OR8U8P0C7N1 319 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 METTL15P1P0C7V9 234 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 OR13C7P0DN81 318 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 NPY1RP25929 384 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 SULT1A1P50225 295 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 HBG1P69891 147 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 HBG2P69892 147 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 NHLH2Q02577 135 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 TMEM267Q0VDI3 215 aaPredicted RBP10□□□□□ -0.81
SSSCA1-203ENST00000526877 TMEM14EPQ6UXP3 125 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 SLC24A4Q8NFF2 622 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 OR4C12Q96R67 309 aa10□□□□□ -0.81
SSSCA1-203ENST00000526877 A0A1B0GW64 132 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 IGLC7A0M8Q6 106 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 C15orf62A8K5M9 175 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 CST7O76096 145 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 IFNA4P05014 189 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 SSBP2P81877 361 aaPredicted RBP9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 OPCMLQ14982 345 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 C2orf83Q53S99 150 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 C9orf152Q5JTZ5 239 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 OR10P1Q8NGE3 313 aa9.99□□□□□ -0.81
SSSCA1-203ENST00000526877 OR1S2Q8NGQ3 325 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms