RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 H7C2Y5 167 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 WRBO00258 174 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 KBTBD11O94819 623 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 IFNA7P01567 189 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 CRYGBP07316 175 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 CD1BP29016 333 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 CEACAM3P40198 252 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 VDAC2P45880 294 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 SULT1A1P50225 295 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 OR2B8PP59922 312 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 SPCS3P61009 180 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 HSPE1P61604 102 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 RPS16P62249 146 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 RPL23AP62750 156 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 UBA52P62987 128 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 VAMP2P63027 116 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 BAXQ07812 192 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 LOXL1Q08397 574 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 EXOSC2Q13868 293 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 EBI3Q14213 229 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 TMEM14EPQ6UXP3 125 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 LHFPL4Q7Z7J7 247 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 HAPLN4Q86UW8 402 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 OR8H3Q8N146 312 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 DYNAPQ8N1N2 210 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 OR8H1Q8NGG4 311 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 OR4A16Q8NH70 328 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 OR4A5Q8NH83 315 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 TMEM167AQ8TBQ9 72 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 DTD1Q8TEA8 209 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 RPEQ96AT9 228 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 PHYHIPLQ96FC7 376 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 HARBI1Q96MB7 349 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 CIB3Q96Q77 187 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 ZNF471Q9BX82 626 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 SLC25A31Q9H0C2 315 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 WFDC1Q9HC57 220 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 PRNDQ9UKY0 176 aa4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 TBL2Q9Y4P3 447 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 MAP1AP78559 2803 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-208ENST00000526821 FASNP49327 2511 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 WNK2Q9Y3S1 2297 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 IGHV3-72A0A0B4J1Y9 119 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 CENPVL3A0A0U1RRI6 287 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 RPS10-NUDT3A0A1W2PQS6 291 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 B4DSR2 109 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 TIMM23O14925 209 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 VENTXO95231 258 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 MSMBP08118 114 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 IAPPP10997 89 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 CAV2P51636 162 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 ARL16Q0P5N6 197 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 PSG5Q15238 335 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 RPL7L1Q6DKI1 246 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 HIST2H2BCQ6DN03 193 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 CLEC9AQ6UXN8 241 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 MOB3BQ86TA1 216 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 BAP18Q8IXM2 172 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 Q8N6K4 173 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 TEX45Q8NA69 505 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 UBAC2Q8NBM4 344 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 OR5B3Q8NH48 314 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 VSTM2AQ8TAG5 236 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 MALSU1Q96EH3 234 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 ZNF48Q96MX3 618 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 OR4C12Q96R67 309 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 LPAR2Q9HBW0 351 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 NDUFA4L2Q9NRX3 87 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 PSENENQ9NZ42 101 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 TCF19Q9Y242 345 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 CREBBPQ92793 2442 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 TNCP24821 2201 aa4.89□□□□□ -1.63
ATPAF1-208ENST00000526821 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.89□□□□□ -1.635e-6■■■■□ 22.8
ATPAF1-208ENST00000526821 PDZD2O15018 2839 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 ITPR2Q14571 2701 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 TEX50A0A1B0GTY4 177 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 A0A1B0GW64 132 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 A0A1W2PRD5 423 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 A0A1W2PRF3 423 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 A0A1W2PRM7 423 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 CEBPZOSA8MTT3 80 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 PRSS46E5RG02 174 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 H3BP45 60 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 NPFFO15130 113 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 SLC25A17O43808 307 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 CST7O76096 145 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 NDUFA3O95167 84 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 IFNA17P01571 189 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 TPT1P13693 172 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 MYOD1P15172 320 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 CNTFRP26992 372 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 DYNLT3P51808 116 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 RPL8P62917 257 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 EIF5AP63241 154 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 PRCDQ00LT1 54 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 CFHR3Q02985 330 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 SSX2Q16385 188 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 PRSS8Q16651 343 aa4.88□□□□□ -1.63
ATPAF1-208ENST00000526821 BSXQ3C1V8 233 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms