RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ZNF429Q86V71 674 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 RNASE11Q8TAA1 199 aaKnown RBP12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 RBPMSQ93062 196 aaKnown RBP12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 GALNT14Q96FL9 552 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 THYN1Q9P016 225 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 F11RQ9Y624 299 aaKnown RBP12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 TMEM56-RWDD3S4R434 201 aa12.43□□□□□ -0.42
SSSCA1-202ENST00000526433 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 PPP5D1E7EU14 171 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 BMPR1BO00238 502 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 ST8SIA3O43173 380 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 SAP30O75446 220 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 MFAP2P55001 183 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 SYNJ2BPP57105 145 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 SUPT4H1P63272 117 aaKnown RBP12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 CNPY1Q3B7I2 92 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 TMEM268Q5VZI3 342 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 CLEC19AQ6UXS0 136 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 Q6ZRM9 215 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 OR2C3Q8N628 320 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 GPR146Q96CH1 333 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 ELOVL1Q9BW60 279 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 PRR13Q9NZ81 148 aa12.42□□□□□ -0.42
SSSCA1-202ENST00000526433 TRBV7-1A0A0A6YYK4 115 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 MFSD2BA6NFX1 497 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 TGP01266 2768 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 IFNA17P01571 189 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 CCR6P51684 374 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 ERHP84090 104 aaKnown RBP12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 SPINK9Q5DT21 86 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 TMED4Q7Z7H5 227 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 FAM219AQ8IW50 185 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 OR1L6Q8NGR2 347 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 MRAPQ8TCY5 172 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 CCDC140Q96MF4 163 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 OR4C12Q96R67 309 aa12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
SSSCA1-202ENST00000526433 K7EIL1 84 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 GGCTO75223 188 aaKnown RBP12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 OR2C1O95371 312 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 CLEC3BP05452 202 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 IL7P13232 177 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 TMEM128Q5BJH2 165 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 OR9G4Q8NGQ1 327 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 OR1P1Q8NH06 330 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 VN1R17PQ8TDU5 208 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 IL22RA2Q969J5 263 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
SSSCA1-202ENST00000526433 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
SSSCA1-202ENST00000526433 ANXA3P12429 323 aa12.39□□□□□ -0.43
SSSCA1-202ENST00000526433 ARL3P36405 182 aa12.39□□□□□ -0.43
SSSCA1-202ENST00000526433 IL34Q6ZMJ4 242 aa12.39□□□□□ -0.43
SSSCA1-202ENST00000526433 LINC00299Q6ZSB3 139 aa12.39□□□□□ -0.43
SSSCA1-202ENST00000526433 ZNF502Q8TBZ5 544 aa12.39□□□□□ -0.43
SSSCA1-202ENST00000526433 IGHV3-21A0A0B4J1V1 117 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 CENPXA8MT69 81 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 LYZL2Q7Z4W2 148 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 LGI3Q8N145 548 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 SLC35G3Q8N808 338 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 SCARB1Q8WTV0 552 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 C7orf50Q9BRJ6 194 aaKnown RBP12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 CACNG5Q9UF02 275 aa12.38□□□□□ -0.43
SSSCA1-202ENST00000526433 A0A0B4J2A0 478 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 K7EIM0 57 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 NDUFB6O95139 128 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 CSN3P07498 182 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 SNCAP37840 140 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 SPCS3P61009 180 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 SRPXP78539 464 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 AARDQ4LEZ3 155 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 DEFB121Q5J5C9 76 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 GPHB5Q86YW7 130 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 CENPSQ8N2Z9 138 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 ZNF114Q8NC26 417 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 MISP3Q96FF7 219 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 PRR25Q96S07 402 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 ENY2Q9NPA8 101 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 ZC4H2Q9NQZ6 224 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 SHPKQ9UHJ6 478 aa12.37□□□□□ -0.43
SSSCA1-202ENST00000526433 PLA2G10O15496 165 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 VAMP1P23763 118 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 GPR183P32249 361 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 FAM106AQ4KMX7 169 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 BATF3Q9NR55 127 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 ZNF256Q9Y2P7 627 aaPredicted RBP12.36□□□□□ -0.43
SSSCA1-202ENST00000526433 I3L2K1 104 aa12.35□□□□□ -0.43
SSSCA1-202ENST00000526433 LGALS9O00182 355 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms