RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TEX36Q5VZQ5 186 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LCN8Q6JVE9 175 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SBSNQ6UWP8 590 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HRCT1Q6UXD1 115 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SCXQ7RTU7 201 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM19A1Q7Z5A9 133 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LYG2Q86SG7 212 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MARCH3Q86UD3 253 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LRRC28Q86X40 367 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 PDZD9Q8IXQ8 264 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 UMODL1-AS1Q8N2C9 162 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SVBPQ8N300 66 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC25A45Q8N413 288 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MMGT1Q8N4V1 131 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR11H1Q8NG94 326 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 GPR32P1Q8NGA4 272 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR11G2Q8NGC1 345 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR10P1Q8NGE3 313 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8B12Q8NGG6 310 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR51A4Q8NGJ6 313 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8D4Q8NGM9 314 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR13C4Q8NGS5 318 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5H6Q8NGV6 325 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR11H2Q8NH07 326 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4X1Q8NH49 305 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CANT1Q8WVQ1 401 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BHQ93079 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ARL11Q969Q4 196 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM203Q969S6 136 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 GPR146Q96CH1 333 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CMBLQ96DG6 245 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 GNPNAT1Q96EK6 184 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CCDC115Q96NT0 180 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 C12orf57Q99622 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BNQ99877 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BMQ99879 126 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 HSPB9Q9BQS6 159 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LXNQ9BS40 222 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ADAT1Q9BUB4 502 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 DDA1Q9BW61 102 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MS4A8Q9BY19 250 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 OR2H1Q9GZK4 316 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM126AQ9H061 195 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 GTSF1LQ9H1H1 148 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TLNRD1Q9H1K6 362 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MIXL1Q9H2W2 232 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 BANF2Q9H503 90 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 VSIRQ9H7M9 311 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00574Q9H8X3 128 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SND1-IT1Q9HBX3 110 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPL16Q9NX20 251 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 IDI2-AS1Q9NZ38 188 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF492Q9P255 531 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC23A2Q9UGH3 650 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LAMTOR3Q9UHA4 124 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 RPUSD1Q9UJJ7 312 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 PRNDQ9UKY0 176 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 BOKQ9UMX3 212 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 BAIAP2Q9UQB8 552 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 LAMTOR2Q9Y2Q5 125 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TIMM9Q9Y5J7 89 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 SOX21Q9Y651 276 aaPredicted RBP0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 CAMTA1Q9Y6Y1 1673 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 TNS2Q63HR2 1409 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 UHRF1BP1Q6BDS2 1440 aa0.71□□□□□ -2.3
ECHDC1-219ENST00000526299 EIF3AQ14152 1382 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CCNB3Q8WWL7 1395 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TONSLQ96HA7 1378 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 DOCK8Q8NF50 2099 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 GRIN2BQ13224 1484 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SNAPC4Q5SXM2 1469 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IGHV3OR15-7A0A075B7D8 119 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 BORCS7-ASMTA0A0B4J1R7 106 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV38-1A0A0B4J264 116 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1B0GXF2 115 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1W2PNN7 141 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IGSF23A1L1A6 192 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 A8MWP6 167 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 C8orf87E5RJ46 101 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 F8W036 122 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 H3BT86 120 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 GABARAPH6UMI1 98 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 K7ERJ3 54 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC22A1O15245 554 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 NDUFB3O43676 98 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SYNGR1O43759 233 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PIAS1O75925 651 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 FSTL3O95633 263 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR2H2O95918 312 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OXTP01178 125 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IFNA10P01566 189 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IFNA17P01571 189 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1-39P01597 117 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1D-39P04432 117 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IFNA4P05014 189 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SRP19P09132 144 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CXCL1P09341 107 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5G3P0C626 314 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TSPAN19P0C672 248 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF705BP0CI00 300 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms