RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 OR1P1Q8NH06 330 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 MRGPRFQ96AM1 343 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 PALMDQ9NP74 551 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 ZC4H2Q9NQZ6 224 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 C19orf73Q9NVV2 129 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 S4R3C0 116 aa13.97□□□□□ -0.17
TSPAN4-216ENST00000526055 C3orf85A0A1B0GTC6 90 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 DISC1C4P0D8 188 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 GSTZ1O43708 216 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 TNFSF8P32971 234 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 PPP5CP53041 499 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 ELLP55199 621 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 HSPE1P61604 102 aaKnown RBP13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 PRCDQ00LT1 54 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 CD300EQ496F6 205 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 SPSB3Q6PJ21 355 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 PLET1Q6UQ28 207 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 MARC2Q969Z3 335 aa13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 BSCL2Q96G97 398 aaPredicted RBP13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 GAR1Q9NY12 217 aaKnown RBP13.96□□□□□ -0.17
TSPAN4-216ENST00000526055 ZNF320A2RRD8 509 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 FABP12A6NFH5 140 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 DBX1A6NMT0 343 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 TGOLN2O43493 480 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 AKAIN1P0CW23 69 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 PI3P19957 117 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 CBLN1P23435 193 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 GPR183P32249 361 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 TP53RKQ96S44 253 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 ZNF436Q9C0F3 470 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 ZMAT4Q9H898 229 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 BATF3Q9NR55 127 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 C21orf62Q9NYP8 219 aa13.95□□□□□ -0.18
TSPAN4-216ENST00000526055 TMEM213A2RRL7 107 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 IZUMO1RA6ND01 250 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 UCP1P25874 307 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 MFAP2P55001 183 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 MARCH1Q8TCQ1 289 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 PRRT1Q99946 306 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 SLC2A8Q9NY64 477 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 C14orf166Q9Y224 244 aaKnown RBP13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 UFC1Q9Y3C8 167 aa13.94□□□□□ -0.18
TSPAN4-216ENST00000526055 A6NHS1 94 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 ZNF785A8K8V0 405 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 P0C879 139 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 AKR1C2P52895 323 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 ERHP84090 104 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 TRIM16LQ309B1 348 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 SCARB1Q8WTV0 552 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 SOSTQ9BQB4 213 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 PLEKHA3Q9HB20 300 aa13.93□□□□□ -0.18
TSPAN4-216ENST00000526055 ANKRD20A5PA0PJZ0 165 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 K7EIM0 57 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 IGKV1-5P01602 117 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 C8orf88P0DMB2 117 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 FCGR2BP31994 310 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 SPANXN2Q5MJ10 180 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 ZNF57Q68EA5 555 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 FAM219AQ8IW50 185 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 OR4C16Q8NGL9 310 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 TXN2Q99757 166 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 TM2D3Q9BRN9 247 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 MRPL27Q9P0M9 148 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-216ENST00000526055 TRAV25A0A0B4J276 109 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 NDUFA4O00483 81 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 UNQ9165/PRO28630Q6UXU0 137 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 UXS1Q8NBZ7 420 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 TMEM190Q8WZ59 177 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 SCGB3A2Q96PL1 93 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 RCHY1Q96PM5 261 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 RTBDNQ9BSG5 229 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 PDCD10Q9BUL8 212 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 TMEM222Q9H0R3 208 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 SCP2D1Q9UJQ7 156 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 GPR132Q9UNW8 380 aa13.91□□□□□ -0.18
TSPAN4-216ENST00000526055 A0A0B4J293 547 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 OR2T8A6NH00 312 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 CDS2O95674 445 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 CD81P60033 236 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 DHODHQ02127 395 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 FAAP20Q6NZ36 180 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 CCDC190Q86UF4 302 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 NEURL2Q9BR09 285 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 C5orf66Q9H5L9 145 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 DAZ1Q9NQZ3 744 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-216ENST00000526055 TEX13DA0A0J9YY54 714 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 F8W735 103 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 I3L2K1 104 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 ETV6P41212 452 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 MFAP4P55083 255 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 RELQ04864 619 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 GUCA2BQ16661 112 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 ANKRD55Q3KP44 614 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms