RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DPM3Q9P2X0 92 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 ZNF221Q9UK13 617 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 NUP50Q9UKX7 468 aa3.54□□□□□ -1.84
USP48-211ENST00000526044 NBPF19A0A087WUL8 3843 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 SPG11Q96JI7 2443 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 TACC2O95359 2948 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 A0A1W2PPV4 95 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 OR5H14A6NHG9 310 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 LY6LH3BQJ8 138 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 BUB1B-PAK6H3BSN5 160 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 HSD17B6O14756 317 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 NPFFO15130 113 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 SLC31A2O15432 143 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 PGAM2P15259 253 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 S100GP29377 79 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 SRP14P37108 136 aaKnown RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 CCR6P51684 374 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 CX3CL1P78423 397 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 KLRD1Q13241 179 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 ASAH1Q13510 395 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 HLA-DRB5Q30154 266 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 C14orf177Q52M58 125 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 KLF17Q5JT82 389 aaPredicted RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 FAM120AOSQ5T036 256 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 MINOS1Q5TGZ0 78 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 AADACL3Q5VUY0 350 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 IDO2Q6ZQW0 420 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 IL17RELQ6ZVW7 336 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 LHFPL1Q86WI0 220 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 CMTM1Q8IZ96 169 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 SLC38A6Q8IZM9 456 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 LINC00311Q8N616 119 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 ZNF645Q8N7E2 425 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 OR5M8Q8NGP6 311 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 OR13C8Q8NGS7 320 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 MARCH1Q8TCQ1 289 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 GLYATL2Q8WU03 294 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 TOMM40LQ969M1 308 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 AKR1E2Q96JD6 320 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 S1PR3Q99500 378 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 SLC25A21Q9BQT8 299 aaPredicted RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 AGMATQ9BSE5 352 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 BEX2Q9BXY8 128 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 PARP12Q9H0J9 701 aaKnown RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 PRELID1Q9Y255 219 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 CBY1Q9Y3M2 126 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 TBL2Q9Y4P3 447 aaKnown RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 AMMECR1Q9Y4X0 333 aaPredicted RBP3.53□□□□□ -1.84
USP48-211ENST00000526044 MINOS1-NBL1R4GNA1 71 aa3.53□□□□□ -1.84
USP48-211ENST00000526044 CSMD2Q7Z408 3487 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 TRAV40A0A0B4J280 105 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 IGKV1D-13A0A0B4J2D9 117 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ODF3BA8MYP8 253 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 OOSP1A8MZH6 123 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 M0R1X1 148 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 GPR31O00270 319 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ATP6V0E1O15342 81 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 PGLYRP1O75594 196 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 NDUFB6O95139 128 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 IGHV4-59P01825 116 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 TCRBP04435 133 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 CTSDP07339 412 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 IGKV1-13P0DP09 117 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 GNRHRP30968 328 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 BRS3P32247 399 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 SAA4P35542 130 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 NKX2-1P43699 371 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 REG1BP48304 166 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 BAMBIQ13145 260 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 FCN2Q15485 313 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 SURF2Q15527 256 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 MSMO1Q15800 293 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ABCA11PQ4W5N1 156 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 PHLDA2Q53GA4 152 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 RPL39P5Q59GN2 51 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 FFAR4Q5NUL3 377 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 TPTE2P1Q5T6R2 138 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 FAM71F2Q6NXP2 309 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 RNASEKQ6P5S7 137 aaKnown RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 BRD3OSQ6XYD6 125 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZNF818PQ6ZRF7 136 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZNF833PQ6ZTB9 187 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 Q71RC1 249 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 MOB3BQ86TA1 216 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 TGIF2LXQ8IUE1 241 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 SELENOHQ8IZQ5 122 aaKnown RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 DRAM1Q8N682 238 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZDHHC22Q8N966 263 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 DUSP18Q8NEJ0 188 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 OR4P4Q8NGL7 312 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ENKURQ8TC29 256 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 RPEQ96AT9 228 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZNF486Q96H40 463 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 ADTRPQ96IZ2 230 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZNF251Q9BRH9 671 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms