RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 FXYD7P58549 80 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 RPL8P62917 257 aaKnown RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 SLC25A53Q5H9E4 307 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 RIPPLY2Q5TAB7 128 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 OR4B1Q8NGF8 309 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 NPIPB3Q92617 1050 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 LSM10Q969L4 123 aaKnown RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 MED12LQ86YW9 2145 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 EML5Q05BV3 1969 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 IGLV3-12A0A075B6K2 115 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 NCBP2LA6PVI3 153 aaKnown RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 RBFOX2O43251 390 aaKnown RBP eCLIP5.8□□□□□ -1.485e-7■■■■□ 21.2
TGFBR3-207ENST00000525962 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 RND2P52198 227 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 ZNF138P52744 262 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 KLF3P57682 345 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 C10orf55Q5SWW7 151 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 Q6ZPA2 131 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 TGIF2LYQ8IUE0 185 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 OR10W1Q8NGF6 305 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 OR9G1Q8NH87 305 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 DNASE2BQ8WZ79 361 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 TMEM208Q9BTX3 173 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 WDR54Q9H977 334 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 SAP30LQ9HAJ7 183 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 POLR3KQ9Y2Y1 108 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 AMMECR1Q9Y4X0 333 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 MALRD1Q5VYJ5 2156 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 B4E171 279 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 TRANK1O15050 2925 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 CFPP27918 469 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 CSN1S1P47710 185 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 FGF23Q9GZV9 251 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 RNF115Q9Y4L5 304 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 COL4A4P53420 1690 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 SH2D7A6NKC9 451 aaPredicted RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 PFN1P07737 140 aaKnown RBP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 CYC1P08574 325 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 LINC00614P0C842 121 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 MAS1LP35410 378 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 DLX1P56177 255 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 TRA2AQ13595 282 aaKnown RBP eCLIP5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 TCF24Q7RTU0 167 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 GBGT1Q8N5D6 347 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 TMEM116Q8NCL8 245 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 SPSB4Q96A44 273 aa5.8□□□□□ -1.48
TGFBR3-207ENST00000525962 EML6Q6ZMW3 1958 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 LNP1A1A4G5 178 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 CGB1A6NKQ9 187 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 SLC25A17O43808 307 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 FOXF2Q12947 444 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM216BQ8N7L0 139 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 MBD3L1Q8WWY6 194 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 MAP1LC3CQ9BXW4 147 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 PROK2Q9HC23 129 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 SPAARA0A1B0GVQ0 90 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 LGALS4P56470 323 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 TMEM177Q53S58 311 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 SLC35E4Q6ICL7 350 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 C5orf17Q8NAS9 161 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 MIEN1Q9BRT3 115 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 ZNF71Q9NQZ8 489 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 YTHDF2Q9Y5A9 579 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 IGHV3OR16-13A0A075B7E8 117 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 IGHV3-74A0A0B4J1X5 117 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 TEX50A0A1B0GTY4 177 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 DNPH1O43598 174 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 NDUFB3O43676 98 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 ADH4P08319 380 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 HSPE1P61604 102 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 SRSF6Q13247 344 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 VMA21Q3ZAQ7 101 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 PMS2CLQ68D20 193 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 BPIFA4PQ86YQ2 179 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 ZADH2Q8N4Q0 377 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 ZBTB34Q8NCN2 500 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 OR5R1Q8NH85 324 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 SNRNP40Q96DI7 357 aaKnown RBP5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 ZNF703Q9H7S9 590 aaPredicted RBP5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 IL36BQ9NZH7 164 aa5.79□□□□□ -1.48
TGFBR3-207ENST00000525962 CEP295Q9C0D2 2601 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A10PA6NDY2 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A18PA6NE21 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A16PA6NEW6 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 GAGE10A6NGK3 116 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 OR4C46A6NHA9 309 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A20PA6NIJ5 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A8PA6NJQ4 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A7PA6NKC0 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A22PA8MWA6 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A12PA8MX19 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A5PA8MXJ8 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A23PA8MXZ1 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 ORM1P02763 201 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A15PP0C7V4 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A13PP0C7W8 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A14PP0C7W9 464 aa5.78□□□□□ -1.48
TGFBR3-207ENST00000525962 FAM90A24PP0C7X0 464 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms