RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 ZNF404Q494X3 552 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 RNASE10Q5GAN6 216 aaKnown RBP3.42□□□□□ -1.86
CD44-220ENST00000525688 OR2B11Q5JQS5 317 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 FBXW12Q6X9E4 464 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 RFLNAQ6ZTI6 216 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 ZNF615Q8N8J6 731 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 ZIC4Q8N9L1 334 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 RHOXF1Q8NHV9 184 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 RXFP4Q8TDU9 374 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 GPR119Q8TDV5 335 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 PTX4Q96A99 478 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 GPR146Q96CH1 333 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 PLEKHB2Q96CS7 222 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 FXYD5Q96DB9 178 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 NEURL3Q96EH8 262 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 SLC25A44Q96H78 314 aaPredicted RBP3.42□□□□□ -1.86
CD44-220ENST00000525688 OR7D2Q96RA2 312 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 PYGO2Q9BRQ0 406 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 TMEM70Q9BUB7 260 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 TBL1XR1Q9BZK7 514 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 CHST6Q9GZX3 395 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 NOX3Q9HBY0 568 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 CALML5Q9NZT1 146 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 TMEM216Q9P0N5 145 aa3.42□□□□□ -1.86
CD44-220ENST00000525688 ANKRD11Q6UB99 2663 aaPredicted RBP3.42□□□□□ -1.86
CD44-220ENST00000525688 COL5A1P20908 1838 aaPredicted RBP3.42□□□□□ -1.86
CD44-220ENST00000525688 TP53BP1Q12888 1972 aaPredicted RBP3.42□□□□□ -1.86
CD44-220ENST00000525688 UNC79Q9P2D8 2635 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 USP24Q9UPU5 2620 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 ZFHX4Q86UP3 3567 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 ATRXP46100 2492 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 TRAV36DV7A0A075B6V5 113 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 RGS5O15539 181 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 NDUFC2O95298 119 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 PIRTP0C851 137 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 CPMP14384 443 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 ORM2P19652 201 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 SPINT3P49223 89 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 EMP1P54849 157 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 SYNJ2BPP57105 145 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 TAS2R19P59542 299 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 ELOCQ15369 112 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 OR4C6Q8NH72 309 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 MBD3L1Q8WWY6 194 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 OR5P3Q8WZ94 311 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 COX14Q96I36 57 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 VSIG2Q96IQ7 327 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 GPR82Q96P67 336 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 LINC01587Q99440 93 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 TMEM147Q9BVK8 224 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 OR52D1Q9H346 318 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 TCEAL2Q9H3H9 227 aaPredicted RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 ZNF702PQ9H963 129 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 DAZ1Q9NQZ3 744 aaKnown RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 AIG1Q9NVV5 245 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 INSIG2Q9Y5U4 225 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 HEBP2Q9Y5Z4 205 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 U3KQA8 63 aa3.41□□□□□ -1.86
CD44-220ENST00000525688 GOLGA4Q13439 2230 aaKnown RBP3.41□□□□□ -1.86
CD44-220ENST00000525688 ATMQ13315 3056 aa3.4□□□□□ -1.86
CD44-220ENST00000525688 KNTC1P50748 2209 aa3.4□□□□□ -1.86
CD44-220ENST00000525688 KALRNO60229 2985 aa3.4□□□□□ -1.86
CD44-220ENST00000525688 CHD6Q8TD26 2715 aa3.4□□□□□ -1.86
CD44-220ENST00000525688 MGAQ8IWI9 3026 aa3.4□□□□□ -1.86
CD44-220ENST00000525688 IGKV1-27A0A075B6S5 117 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 C5orf63A6NC05 138 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 KNCNA6PVL3 124 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 K7ERU9 68 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 SS18L1O75177 396 aaPredicted RBP3.4□□□□□ -1.87
CD44-220ENST00000525688 SUPT7LO94864 414 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 TNFP01375 233 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 IGHV3-48P01763 117 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 CSN2P05814 226 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 GIG44P09565 113 aaPredicted RBP3.4□□□□□ -1.87
CD44-220ENST00000525688 TSPAN19P0C672 248 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 METTL15P1P0C7V9 234 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 BLVRBP30043 206 aaPredicted RBP3.4□□□□□ -1.87
CD44-220ENST00000525688 POLR2IP36954 125 aaKnown RBP3.4□□□□□ -1.87
CD44-220ENST00000525688 RBP2P50120 134 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 WNT4P56705 351 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 DSCR10P59022 87 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.87
CD44-220ENST00000525688 IFITM3Q01628 133 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 REG3AQ06141 175 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 BAMBIQ13145 260 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 ERCC8Q13216 396 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 BTN1A1Q13410 526 aa3.4□□□□□ -1.87
CD44-220ENST00000525688 KCNJ8Q15842 424 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms