RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 H3BP45 60 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 I3L521 148 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 WRBO00258 174 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 B3GALNT1O75752 331 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 ATG12O94817 140 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 DUS4LO95620 317 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 LGALS1P09382 135 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 SULT1A3P0DMM9 295 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 SULT1A4P0DMN0 295 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 CD33P20138 364 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 HOXD3P31249 432 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 CDX1P47902 265 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 DEFA1P59665 94 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 DEFA3P59666 94 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 PRCDQ00LT1 54 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 ATP5G2Q06055 141 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 SMCO1Q147U7 214 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 C15orf32Q32M92 178 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 OXLD1Q5BKU9 147 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 PLET1Q6UQ28 207 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 MRPL41Q8IXM3 137 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 OR2C3Q8N628 320 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 COMMD1Q8N668 190 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 RNF152Q8N8N0 203 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 OR1N2Q8NGR9 330 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 OR5B3Q8NH48 314 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 COQ8AQ8NI60 647 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 MYOZ3Q8TDC0 251 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF431Q8TF32 576 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 C4orf3Q8WVX3 66 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 DCUN1D4Q92564 292 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 DPF1Q92782 380 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 DLX4Q92988 240 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 LSM10Q969L4 123 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 CCDC140Q96MF4 163 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 PDCD10Q9BUL8 212 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 ENY2Q9NPA8 101 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 HEYLQ9NQ87 328 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 FAM212BQ9NTI7 297 aaPredicted RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 ZFP57Q9NU63 452 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 FKBP11Q9NYL4 201 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 SHPKQ9UHJ6 478 aa3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 F11RQ9Y624 299 aaKnown RBP3.55□□□□□ -1.84
CHMP4A-202ENST00000524955 TRBV9A0A0B4J1U6 114 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 A0A1B0GU03 582 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 C5orf51A6NDU8 294 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 OR2T8A6NH00 312 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 LINC01619G3V211 115 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 K7EIM0 57 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 BMPR1BO00238 502 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 GOSR2O14653 212 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF207O43670 478 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 OR2C1O95371 312 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 MT-CO2P00403 227 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 IFNA10P01566 189 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 CLEC3BP05452 202 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 CRYGCP07315 174 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 FGF2P09038 288 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 RNASE2P10153 161 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 GPR183P32249 361 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 SNCAP37840 140 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 SYNJ2BPP57105 145 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 SPCS3P61009 180 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 POLR2GP62487 172 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 SRPXP78539 464 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ERHP84090 104 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 TNFRSF9Q07011 255 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF616Q08AN1 781 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 IAH1Q2TAA2 248 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 Q56UQ5 140 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 PRR31Q5SQ13 230 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 THOC7Q6I9Y2 204 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF343Q6P1L6 599 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF429Q86V71 674 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 C12orf45Q8N5I9 185 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 LINC00482Q8N8I6 264 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZBTB8BQ8NAP8 495 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 NECAP1Q8NC96 275 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 DUSP18Q8NEJ0 188 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4F17Q8NGA8 305 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 SCARB1Q8WTV0 552 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 MITD1Q8WV92 249 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM170AQ8WVE7 144 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM68Q96MH6 324 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4F4Q96R69 305 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 FNDC4Q9H6D8 234 aaPredicted RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 SLA2Q9H6Q3 261 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 MRPL36Q9P0J6 103 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 PEF1Q9UBV8 284 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF580Q9UK33 172 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF257Q9Y2Q1 563 aa3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 LSM5Q9Y4Y9 91 aaKnown RBP3.54□□□□□ -1.84
CHMP4A-202ENST00000524955 COL6A5A8TX70 2615 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHV3-49A0A0A0MS15 119 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 A0A0G2JLM5 398 aa3.53□□□□□ -1.84
CHMP4A-202ENST00000524955 ZNF320A2RRD8 509 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms