RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	DDT	P30046	118 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	AGTR1	P30556	359 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	FAU	P35544	74 aa	Known RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	PPIC	P45877	212 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	SLC25A1	P53007	311 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	CAV3	P56539	151 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	KLF3	P57682	345 aa	Predicted RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR12D2	P58182	307 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	IGLV3-21	P80748	117 aa	Predicted RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF85	Q03923	595 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	ECH1	Q13011	328 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	PPP1R1A	Q13522	171 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	TMEM97	Q5BJF2	176 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	UNQ9370/PRO34162	Q6UXP9	181 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	RPP25L	Q8N5L8	163 aa	Known RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	YIPF7	Q8N8F6	280 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	NRAC	Q8N912	160 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR10G9	Q8NGN4	311 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR1K1	Q8NGR3	316 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR1J4	Q8NGS1	313 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR2T4	Q8NH00	348 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR4K13	Q8NH42	304 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	PFN4	Q8NHR9	129 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	TCTEX1D2	Q8WW35	142 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	RGP1	Q92546	391 aa	Predicted RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	RBPMS	Q93062	196 aa	Known RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR11A1	Q9GZK7	315 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	EDA2R	Q9HAV5	297 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	EXOSC3	Q9NQT5	275 aa	Known RBP	4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	SPANXA1	Q9NS26	97 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	TAS2R8	Q9NYW2	309 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	ZNF224	Q9NZL3	707 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	OR1A1	Q9P1Q5	309 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	PRO0628	Q9UI54	55 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	GNG8	Q9UK08	70 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	SIGLEC9	Q9Y336	463 aa		4.03	□□□□□ -1.76
PABPC1-223	ENST00000523636	TRAV27	A0A087WT01	109 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	CEACAM18	A8MTB9	384 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	NPIPB9	F8W1W9	429 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	DNASE2	O00115	360 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF593	O00488	134 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MFNG	O00587	321 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	FCN1	O00602	326 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	XKRY	O14609	159 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	TP53I11	O14683	189 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	PDE6D	O43924	150 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	LHB	P01229	141 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	CD14	P08571	375 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MRPL3	P09001	348 aa	Known RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	GIP	P09681	153 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MYOD1	P15172	320 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	HIST1H1B	P16401	226 aa	Known RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF83	P51522	516 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	RPL8	P62917	257 aa	Known RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	ARL16	Q0P5N6	197 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	EIF2B1	Q14232	305 aa	Known RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	CDK5R1	Q15078	307 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	RBMY1F	Q15415	496 aa	Known RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	SURF2	Q15527	256 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	HIST3H3	Q16695	136 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	DEFB112	Q30KQ8	113 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	UBE2NL	Q5JXB2	153 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	FAM27D1	Q5T7N8	215 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	FAM78B	Q5VT40	261 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	LEMD1	Q68G75	181 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	GVQW1	Q8N7I0	195 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	GATD1	Q8NB37	220 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR4M1	Q8NGD0	313 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR6N1	Q8NGY5	312 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR13G1	Q8NGZ3	307 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF563	Q8TA94	476 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	ZNF431	Q8TF32	576 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MRAP2	Q96G30	205 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR8B4	Q96RC9	309 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	GPX7	Q96SL4	187 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	RASL11B	Q9BPW5	248 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	VPS25	Q9BRG1	176 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR51J1	Q9H342	316 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MEPE	Q9NQ76	525 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MMP26	Q9NRE1	261 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	MED11	Q9P086	117 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	IL36RN	Q9UBH0	155 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	SLC25A15	Q9Y619	301 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636		V9GY05	133 aa		4.02	□□□□□ -1.77
PABPC1-223	ENST00000523636	IGHV3OR16-10	A0A075B7F0	116 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636		A0A087WZ39	114 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636		A0A1B0GVY2	172 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	C7orf66	A4D0T2	115 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	GABARAP	H6UMI1	98 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	MRPS12	O15235	138 aa	Known RBP	4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	OR2T1	O43869	369 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	ICOSLG	O75144	302 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	CA11	O75493	328 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	SCO1	O75880	301 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	IFNA7	P01567	189 aa		4.01	□□□□□ -1.77
PABPC1-223	ENST00000523636	ESD	P10768	282 aa		4.01	□□□□□ -1.77

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