RNA–Protein interactions for RNA: ENST00000523310.1

CCNC-212, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-212ENST00000523310 SLC7A6Q92536 515 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 PPP1R2P1Q96PQ5 205 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 MRPS26Q9BYN8 205 aaKnown RBP0.67□□□□□ -2.3
CCNC-212ENST00000523310 UBAP1Q9NZ09 502 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 RSL24D1Q9UHA3 163 aaKnown RBP0.67□□□□□ -2.3
CCNC-212ENST00000523310 LSM5Q9Y4Y9 91 aaKnown RBP0.67□□□□□ -2.3
CCNC-212ENST00000523310 DLG5Q8TDM6 1919 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 TOPBP1Q92547 1522 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 ROBO3Q96MS0 1386 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 DOCK5Q9H7D0 1870 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 NEO1Q92859 1461 aa0.67□□□□□ -2.3
CCNC-212ENST00000523310 FREM1Q5H8C1 2179 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 TRBV10-2A0A0K0K1G8 114 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 FAM236DA0A1B0GTK5 79 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 CLDN24A6NM45 220 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 GOLGA6L19H0YKK7 550 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 TNNC2P02585 160 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 CRPP02741 224 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 C1QAP02745 245 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 TCRBP04435 133 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 PRM2P04554 102 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 RPS17P08708 135 aaKnown RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 TRGC1P0CF51 173 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 FAM236CP0DP71 79 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 HAAOP46952 286 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 SULT1A1P50225 295 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 ZNF80P51504 273 aaPredicted RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 DEFA1P59665 94 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 SNRPD2P62316 118 aaKnown RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 HIST1H4AP62805 103 aaKnown RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 CCL20P78556 96 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 RPL18Q07020 188 aaKnown RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 ITGB3BPQ13352 177 aaPredicted RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 GRK1Q15835 563 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 Q1T7F1 81 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 ACOT6Q3I5F7 207 aaPredicted RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 C9orf64Q5T6V5 341 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 HIST2H3PS2Q5TEC6 136 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 AADACL3Q5VUY0 350 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 DCXRQ7Z4W1 244 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 LRRC25Q8N386 305 aaPredicted RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 CLDN22Q8N7P3 220 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 ZNF676Q8N7Q3 588 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 C15orf53Q8NAA6 179 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 TSPAN32Q96QS1 320 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 DOHHQ9BU89 302 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 DERL1Q9BUN8 251 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 C11orf68Q9H3H3 251 aaKnown RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 MRPL27Q9P0M9 148 aaKnown RBP0.66□□□□□ -2.3
CCNC-212ENST00000523310 LHFPL6Q9Y693 200 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 TONSLQ96HA7 1378 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 KIF13BQ9NQT8 1826 aa0.66□□□□□ -2.3
CCNC-212ENST00000523310 HEATR5AQ86XA9 2040 aa0.65□□□□□ -2.3
CCNC-212ENST00000523310 SETD5Q9C0A6 1442 aa0.65□□□□□ -2.3
CCNC-212ENST00000523310 A0A1B0GV50 99 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 M0R036 132 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 KPNA3O00505 521 aaPredicted RBP0.65□□□□□ -2.31
CCNC-212ENST00000523310 ORC5O43913 435 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 MRPS14O60783 128 aaKnown RBP0.65□□□□□ -2.31
CCNC-212ENST00000523310 NOS1APO75052 506 aaPredicted RBP0.65□□□□□ -2.31
CCNC-212ENST00000523310 HLA-DRB1P01911 266 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 CD79AP11912 226 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BOP23527 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BBP33778 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BDP58876 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BCP62807 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 CDK5R1Q15078 307 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 KCNJ8Q15842 424 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST2H2BEQ16778 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.65□□□□□ -2.31
CCNC-212ENST00000523310 LPCAT3Q6P1A2 487 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 Q8N2B8 174 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 ZNF565Q8N9K5 539 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 MBD3L1Q8WWY6 194 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BHQ93079 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 IMP4Q96G21 291 aaKnown RBP0.65□□□□□ -2.31
CCNC-212ENST00000523310 CCDC42Q96M95 316 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BNQ99877 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 HIST1H2BMQ99879 126 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 UCK1Q9HA47 277 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 FBXL12Q9NXK8 326 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 NUP155O75694 1391 aa0.65□□□□□ -2.31
CCNC-212ENST00000523310 ZNF106Q9H2Y7 1883 aaKnown RBP0.65□□□□□ -2.31
CCNC-212ENST00000523310 CCDC144AA2RUR9 1427 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 PIK3C2GO75747 1445 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 ECM29Q5VYK3 1845 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 IGKV1D-42A0A075B6H8 117 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 MEIKINA0A087WXM9 373 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 TRAV26-2A0A0B4J265 109 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 PQLC2LA1A4F0 135 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 TRAPPC13A5PLN9 417 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 SMIM9A6NGZ8 99 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 FABP5P3A8MUU1 101 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 F8W036 122 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 BUB1B-PAK6H3BSN5 160 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 PSMD12O00232 456 aaPredicted RBP0.64□□□□□ -2.31
CCNC-212ENST00000523310 SLC22A1O15245 554 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 CNIH1O95406 144 aa0.64□□□□□ -2.31
CCNC-212ENST00000523310 RPS4Y1P22090 263 aaKnown RBP0.64□□□□□ -2.31
CCNC-212ENST00000523310 AESQ08117 197 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms