RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 UBQLN2Q9UHD9 624 aa11.96□□□□□ -0.49
CSGALNACT1-211ENST00000522854 TEX46H3BTG2 121 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 JTBO76095 146 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 IGHV3-48P01763 117 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 KRTAP1-1Q07627 177 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 UBAC2Q8NBM4 344 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 OR10P1Q8NGE3 313 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 HSPB9Q9BQS6 159 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 MEGF9Q9H1U4 602 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FBXO7Q9Y3I1 522 aa11.96□□□□□ -0.5
CSGALNACT1-211ENST00000522854 LINC01548A6NM66 108 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 PRSS46E5RG02 174 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FBP1P09467 338 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 HBG1P69891 147 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 HBG2P69892 147 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 CX3CL1P78423 397 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FXYD3Q14802 87 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SMR3AQ99954 134 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RSG1Q9BU20 258 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SLC25A32Q9H2D1 315 aa11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SETXQ7Z333 2677 aaKnown RBP11.95□□□□□ -0.5
CSGALNACT1-211ENST00000522854 MTORP42345 2549 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ANKRD34BA5PLL1 514 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SNCAP37840 140 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 MFAP2P55001 183 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 P2RX4Q99571 388 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 BAHCC1Q9P281 2608 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 BORCS7-ASMTA0A0B4J1R7 106 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RPS10-NUDT3A0A1W2PQS6 291 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SMCO3A2RU48 225 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FSHBP01225 129 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ATP6V0CP27449 155 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 BSXQ3C1V8 233 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 STPG2Q8N412 459 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SLC25A33Q9BSK2 321 aa11.94□□□□□ -0.5
CSGALNACT1-211ENST00000522854 IGHV7-81A0A0B4J1V7 117 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 IGHV4-59P01825 116 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 PRH1P02810 166 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 AMY1AP04745 511 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ZNF266Q14584 549 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 LRRC75BQ2VPJ9 315 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ARSJQ5FYB0 599 aaPredicted RBP11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SLC25A24Q6NUK1 477 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ABHD5Q8WTS1 349 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ZNF48Q96MX3 618 aaPredicted RBP11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ARV1Q9H2C2 271 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 DMRT1Q9Y5R6 373 aa11.93□□□□□ -0.5
CSGALNACT1-211ENST00000522854 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 A0A1W2PN81 502 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 CHRNA7P36544 502 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FHITP49789 147 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ERHP84090 104 aaKnown RBP11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 GINS3Q9BRX5 216 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 MAS1LP35410 378 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RAB11AP62491 216 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 C5orf56Q8N8D9 126 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 CXorf58Q96LI9 332 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RBM14Q96PK6 669 aaKnown RBP11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
CSGALNACT1-211ENST00000522854 DFFBO76075 338 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 NMBP08949 121 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SPP1P10451 314 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 DEFA5Q01523 94 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 Q6ZS46 218 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 ARPC1AQ92747 370 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 NF1P21359 2839 aa11.91□□□□□ -0.5
CSGALNACT1-211ENST00000522854 IFNA5P01569 189 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FAM157CP0CG43 387 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 SPNS3Q6ZMD2 512 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 LFNGQ8NES3 379 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 DUX5Q96PT3 197 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 TMEM147Q9BVK8 224 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 C1RLQ9NZP8 487 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 LINC00527Q9UJ94 153 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 LINC00862A6NCI5 91 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 INS-IGF2F8WCM5 200 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 EIF3GO75821 320 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 FGF7P21781 194 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 RAB14P61106 215 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 OR2G3Q8NGZ4 309 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 OR2T6Q8NHC8 308 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 MISP3Q96FF7 219 aa11.9□□□□□ -0.5
CSGALNACT1-211ENST00000522854 VSIRQ9H7M9 311 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms