RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 OR2G3Q8NGZ4 309 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
CTNNA1-236ENST00000522792 LINC00862A6NCI5 91 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 SULT1A2P50226 295 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 SRSF12Q8WXF0 261 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 CELSR1Q9NYQ6 3014 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 IGLC7A0M8Q6 106 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 FGF16O43320 207 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 AREGP15514 252 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 BSXQ3C1V8 233 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 C2orf83Q53S99 150 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 C19orf35Q6ZS72 473 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 CIARTQ8N365 385 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 FAM96BQ9Y3D0 163 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 FBXO7Q9Y3I1 522 aa12.3□□□□□ -0.44
CTNNA1-236ENST00000522792 INS-IGF2F8WCM5 200 aa12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 SCAF4O95104 1147 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 FGF7P21781 194 aa12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 VWC2Q2TAL6 325 aa12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 COMMD7Q86VX2 200 aa12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 TAF15Q92804 592 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 PLXNB1O43157 2135 aa12.29□□□□□ -0.44
CTNNA1-236ENST00000522792 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 J3QLI3 93 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 FHITP49789 147 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 SSMEM1Q8WWF3 244 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 CITED4Q96RK1 184 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 P2RX4Q99571 388 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 FAM103A1Q9BTL3 118 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 SMAD7O15105 426 aaKnown RBP12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 PRH1P02810 166 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 DLK1P80370 383 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 FXYD3Q14802 87 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 ABHD5Q8WTS1 349 aa12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-236ENST00000522792 MLANAQ16655 118 aa12.27□□□□□ -0.44
CTNNA1-236ENST00000522792 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.44
CTNNA1-236ENST00000522792 Q6ZRG5 221 aa12.27□□□□□ -0.44
CTNNA1-236ENST00000522792 Q8N9W7 124 aa12.27□□□□□ -0.44
CTNNA1-236ENST00000522792 SSX3Q99909 188 aa12.27□□□□□ -0.44
CTNNA1-236ENST00000522792 MEGF9Q9H1U4 602 aa12.27□□□□□ -0.44
CTNNA1-236ENST00000522792 PDZD2O15018 2839 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 MDFIC2A0A1B0GVS7 189 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 CAMLGP49069 296 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 CYB5R2Q6BCY4 276 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 BTNL8Q6UX41 500 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 PIFOQ8TCI5 191 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 C22orf15Q8WYQ4 148 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 GGACTQ9BVM4 153 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 C1RLQ9NZP8 487 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 WDR83OSQ9Y284 106 aa12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-236ENST00000522792 PRRC2AP48634 2157 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 FBP1P09467 338 aa12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.453e-9■■■■■ 34.7
CTNNA1-236ENST00000522792 ELLP55199 621 aaPredicted RBP12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 CX3CL1P78423 397 aa12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 FAM213BQ8TBF2 198 aa12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 PFDN2Q9UHV9 154 aa12.26□□□□□ -0.45
CTNNA1-236ENST00000522792 SH2D7A6NKC9 451 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 ATP5IP56385 69 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 NDPQ00604 133 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 AKR1C1Q04828 323 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 ZNF616Q08AN1 781 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 AKR1C8PQ5T2L2 129 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 BCL6BQ8N143 479 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 ARPC1AQ92747 370 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 NPCDR1Q9BY65 106 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 MFAP2P55001 183 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 LY6EQ16553 131 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 SAT2Q96F10 170 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 MISP3Q96FF7 219 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 FOXC2Q99958 501 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 SLC25A33Q9BSK2 321 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 PSMG3Q9BT73 122 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 VSIRQ9H7M9 311 aa12.25□□□□□ -0.45
CTNNA1-236ENST00000522792 NAV3Q8IVL0 2385 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 H3BUX3 64 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 IGHV3-48P01763 117 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 OPRK1P41145 380 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 RAB5CP51148 216 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 CD69Q07108 199 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 ZNF709Q8N972 641 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 HSPB9Q9BQS6 159 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 NPVFQ9HCQ7 196 aa12.24□□□□□ -0.45
CTNNA1-236ENST00000522792 IGHV7-81A0A0B4J1V7 117 aa12.23□□□□□ -0.45
CTNNA1-236ENST00000522792 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms