RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ZNF502Q8TBZ5 544 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 SECTM1Q8WVN6 248 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 C5orf30Q96GV9 206 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 NARS2Q96I59 477 aaKnown RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 GINS3Q9BRX5 216 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 HINT2Q9BX68 163 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 QTRT1Q9BXR0 403 aaKnown RBP4.59□□□□□ -1.67
PABPC1-220ENST00000522658 ATG5Q9H1Y0 275 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 PSORS1C1Q9UIG5 152 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 OR2W1Q9Y3N9 320 aa4.59□□□□□ -1.67
PABPC1-220ENST00000522658 IGLV11-55A0A075B6I3 123 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV3OR16-8A0A075B7F1 116 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 TRAV10A0A0B4J240 114 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 C15orf62A8K5M9 175 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 PTGES3LE9PB15 166 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 TNFSF12O43508 249 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 CD5P06127 495 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 CRYGCP07315 174 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 IL6RP08887 468 aaPredicted RBP4.58□□□□□ -1.68
PABPC1-220ENST00000522658 C8orf88P0DMB2 117 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 PTBP1P26599 531 aaKnown RBP eCLIP4.58□□□□□ -1.686e-18■□□□□ 8
PABPC1-220ENST00000522658 TMEM50BP56557 158 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 RAP2BP61225 183 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 RCN1Q15293 331 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 C2orf76Q3KRA6 126 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 TIMM50Q3ZCQ8 353 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM41BQ5BJD5 291 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 PLAC9Q5JTB6 97 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 SPAG16Q8N0X2 631 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 PUSL1Q8N0Z8 303 aaKnown RBP4.58□□□□□ -1.68
PABPC1-220ENST00000522658 GDPD1Q8N9F7 314 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 ZNF485Q8NCK3 441 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 VN1R17PQ8TDU5 208 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 BORCS5Q969J3 196 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 SRSF8Q9BRL6 282 aaKnown RBP4.58□□□□□ -1.68
PABPC1-220ENST00000522658 ZNF436Q9C0F3 470 aaPredicted RBP4.58□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM231Q9H6L2 316 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 BET1LQ9NYM9 111 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 C21orf62Q9NYP8 219 aa4.58□□□□□ -1.68
PABPC1-220ENST00000522658 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV4-4A0A075B6R2 117 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 PRSS29PA6NIE9 313 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 MFNGO00587 321 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 CASQ2O14958 399 aaPredicted RBP4.57□□□□□ -1.68
PABPC1-220ENST00000522658 DEFB4AO15263 64 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 ST8SIA3O43173 380 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 SNAPC5O75971 98 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 P0DMU3 169 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 FAM231AP0DMU4 169 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 FAM231CP0DMU5 169 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 OR13C7P0DN81 318 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 NQO2P16083 231 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 S100GP29377 79 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 TAS2R31P59538 309 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 FXYD4P59646 89 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 HERV-K104P61576 105 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 RPS25P62851 125 aaKnown RBP4.57□□□□□ -1.68
PABPC1-220ENST00000522658 MRGPRG-AS1Q2M3A8 158 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 AADACL3Q5VUY0 350 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 PVRIGQ6DKI7 326 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 CNIH2Q6PI25 160 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 Q6ZS49 121 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 TPRA1Q86W33 373 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 GBGT1Q8N5D6 347 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 GVQW1Q8N7I0 195 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM116Q8NCL8 245 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 OR1L8Q8NGR8 309 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 OR51H1Q8NH63 302 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 LSM10Q969L4 123 aaKnown RBP4.57□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM56Q96MV1 263 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 DCSTAMPQ9H295 470 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 ACOT13Q9NPJ3 140 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 PLCXD1Q9NUJ7 323 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 RABAC1Q9UI14 185 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 TPRKBQ9Y3C4 175 aa4.57□□□□□ -1.68
PABPC1-220ENST00000522658 FRAS1Q86XX4 4008 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 TRAV14DV4A0A0A6YYC5 116 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV3-21A0A0B4J1V1 117 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 IGHV7-4-1A0A0J9YVY3 117 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 TMEM235A6NFC5 223 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 FOXI3A8MTJ6 420 aaPredicted RBP4.56□□□□□ -1.68
PABPC1-220ENST00000522658 K7EMT4 169 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 SULT1C2O00338 296 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 RGS10O43665 173 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 DFFBO76075 338 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 HPRT1P00492 218 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 IFNA10P01566 189 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 IFNA21P01568 189 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 IFNA17P01571 189 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 HLA-DQB1P01920 261 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 TRAPPC2P0DI81 140 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 TRAPPC2BP0DI82 140 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 MIFP14174 115 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 RAB3BP20337 219 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 NPY1RP25929 384 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 EIF2B2P49770 351 aaKnown RBP4.56□□□□□ -1.68
PABPC1-220ENST00000522658 RPL30P62888 115 aaKnown RBP4.56□□□□□ -1.68
PABPC1-220ENST00000522658 MLLT11Q13015 90 aaPredicted RBP4.56□□□□□ -1.68
PABPC1-220ENST00000522658 CDNFQ49AH0 187 aa4.56□□□□□ -1.68
PABPC1-220ENST00000522658 TCF24Q7RTU0 167 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms