RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 NHLH2Q02577 135 aa16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 STX12Q86Y82 276 aa16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 TMEM86BQ8N661 226 aa16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 SRSF8Q9BRL6 282 aaKnown RBP16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 BOLA1Q9Y3E2 137 aa16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 FBXO7Q9Y3I1 522 aa16.9■□□□□ 0.3
R3HCC1-208ENST00000522012 A0A0D9SG52 128 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 LINC01548A6NM66 108 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 C15orf62A8K5M9 175 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 OR8U8P0C7N1 319 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 EGR2P11161 476 aaPredicted RBP16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 NPY1RP25929 384 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 ZNF345Q14585 488 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 TMEM14EPQ6UXP3 125 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 TMUB2Q71RG4 321 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 HSD17B13Q7Z5P4 300 aaPredicted RBP16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 KCNRGQ8N5I3 272 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 TMEM217Q8N7C4 229 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 ARL6Q9H0F7 186 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 MTORP42345 2549 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 NF1P21359 2839 aa16.89■□□□□ 0.29
R3HCC1-208ENST00000522012 DNAJC9-AS1A6NH13 148 aa16.88■□□□□ 0.29
R3HCC1-208ENST00000522012 ATP6V0E1O15342 81 aa16.88■□□□□ 0.29
R3HCC1-208ENST00000522012 SULT1A1P50225 295 aa16.88■□□□□ 0.29
R3HCC1-208ENST00000522012 OR8G2PQ6IF36 304 aa16.88■□□□□ 0.29
R3HCC1-208ENST00000522012 BSCL2Q96G97 398 aaPredicted RBP16.88■□□□□ 0.29
R3HCC1-208ENST00000522012 IFNA4P05014 189 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 RNASE2P10153 161 aaKnown RBP16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 RAB11AP62491 216 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 BAXQ07812 192 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 LFNGQ8NES3 379 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 ZNF418Q8TF45 676 aaPredicted RBP16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 TMEM170AQ8WVE7 144 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 P2RX4Q99571 388 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 SMIM3Q9BZL3 60 aa16.87■□□□□ 0.29
R3HCC1-208ENST00000522012 S100A11P31949 105 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 SUB1P53999 127 aaKnown RBP eCLIP16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 BSXQ3C1V8 233 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 Q6ZS46 218 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 SLC35E3Q7Z769 313 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 SGMS2Q8NHU3 365 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 ATP5IP56385 69 aaPredicted RBP16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 ARL16Q0P5N6 197 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 ECSCRQ19T08 205 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 C2orf83Q53S99 150 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 ASPHD1Q5U4P2 390 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 ETV3LQ6ZN32 361 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 C19orf35Q6ZS72 473 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 ESM1Q9NQ30 184 aa16.86■□□□□ 0.29
R3HCC1-208ENST00000522012 KANTRA0A1W2PQU2 76 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 IGHG2P01859 326 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 C4BPBP20851 252 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 OPCMLQ14982 345 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 UNQ5815/PRO19632Q6UWF5 114 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 HAPLN4Q86UW8 402 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 OR10P1Q8NGE3 313 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 OR1S2Q8NGQ3 325 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 NPFFR1Q9GZQ6 430 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 FBXL17Q9UF56 701 aa16.85■□□□□ 0.29
R3HCC1-208ENST00000522012 TLN2Q9Y4G6 2542 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 DEFA4P12838 97 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 HBG1P69891 147 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 HBG2P69892 147 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 CLINT1Q14677 625 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 OR5T1Q8NG75 326 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 OR5C1Q8NGR4 320 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 ARPC5LQ9BPX5 153 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 WNT10AQ9GZT5 417 aa16.84■□□□□ 0.29
R3HCC1-208ENST00000522012 PMS2P5A8MQ11 134 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 TRIM77I1YAP6 450 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 BCL2L11O43521 198 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 CTRB1P17538 263 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 CTRB2Q6GPI1 263 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 TTC9CQ8N5M4 171 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 ZNF114Q8NC26 417 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 PRSS22Q9GZN4 317 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 LINC00527Q9UJ94 153 aa16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 F11RQ9Y624 299 aaKnown RBP16.83■□□□□ 0.28
R3HCC1-208ENST00000522012 TET2Q6N021 2002 aaPredicted RBP16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 NPIPB5A8MRT5 1133 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 G3V318 75 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 CRLF1O75462 422 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 FAM157CP0CG43 387 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 SLC38A11Q08AI6 406 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 SLC25A24Q6NUK1 477 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 LILRB2Q8N423 598 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 OR1P1Q8NH06 330 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 TMEM68Q96MH6 324 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 NAV3Q8IVL0 2385 aa16.82■□□□□ 0.28
R3HCC1-208ENST00000522012 TRAV41A0A0B4J266 112 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 CLDN34H7C241 214 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 TAAR5O14804 337 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 FBXO24O75426 580 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 SCAF4O95104 1147 aaKnown RBP16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 CRYGCP07315 174 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 MFAP2P55001 183 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 AKIRIN2Q53H80 203 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 ARSJQ5FYB0 599 aaPredicted RBP16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 PINX1Q96BK5 328 aaKnown RBP16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 MISP3Q96FF7 219 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms