RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 SIP14410 1827 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 ADIPOQQ15848 244 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 KIAA1644Q3SXP7 199 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 ZIC4Q8N9L1 334 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 BEND2Q8NDZ0 799 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 PGLYRP4Q96LB8 373 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 SCGB1A1P11684 91 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 RELQ04864 619 aaPredicted RBP13.61□□□□□ -0.23
USP42-207ENST00000521713 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
USP42-207ENST00000521713 J3KRW8 73 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 THBDP07204 575 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 TMSB15BA0A087X1C1 80 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BKO60814 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 NUDT3O95989 172 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BJP06899 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BOP23527 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BBP33778 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BDP58876 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BCP62807 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST2H2BEQ16778 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 TM4SF20Q53R12 229 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BHQ93079 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BNQ99877 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 HIST1H2BMQ99879 126 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 TMEM56-RWDD3S4R434 201 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 AKAP6Q13023 2319 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
USP42-207ENST00000521713 EFNA2O43921 213 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 CENPWQ5EE01 88 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 TTC9CQ8N5M4 171 aa13.6□□□□□ -0.23
USP42-207ENST00000521713 A0A1B0GW15 77 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 FOXF2Q12947 444 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 CCL1P22362 96 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 OR13A1Q8NGR1 328 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 C5orf30Q96GV9 206 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 GPX4P36969 197 aaPredicted RBP13.59□□□□□ -0.23
USP42-207ENST00000521713 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 UCP1P25874 307 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 MST1P26927 711 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 DSCR9P59020 149 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 ZNF414Q96IQ9 312 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 SPCS1Q9Y6A9 102 aa13.59□□□□□ -0.23
USP42-207ENST00000521713 TFPI2P48307 235 aa13.58□□□□□ -0.23
USP42-207ENST00000521713 COLCA2A8K830 154 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 ZNF324BQ6AW86 544 aaPredicted RBP13.58□□□□□ -0.24
USP42-207ENST00000521713 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 JKAMPQ9P055 326 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 IGFBP3P17936 291 aaPredicted RBP13.58□□□□□ -0.24
USP42-207ENST00000521713 FBLN7Q53RD9 439 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 PLA2G2CQ5R387 149 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 OR5A1Q8NGJ0 315 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 TTC28Q96AY4 2481 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 TRBV24-1A0A075B6N3 115 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 OR11H12B2RN74 326 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 IGHG3P01860 377 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 EMP1P54849 157 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 FAM169BQ8N8A8 192 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 OR11H1Q8NG94 326 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 OR11H2Q8NH07 326 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 GPHA2Q96T91 129 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 FBLN5Q9UBX5 448 aa13.58□□□□□ -0.24
USP42-207ENST00000521713 A0A0G2JLM5 398 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 RPL39P5Q59GN2 51 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 CD5P06127 495 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 NUTF2P61970 127 aaKnown RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 YAE1D1Q9NRH1 226 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 C1QTNF9BB2RNN3 333 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 NDUFS8O00217 210 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 NPPCP23582 126 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 PSG9Q00887 426 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 LY6G6FQ5SQ64 297 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 TCF23Q7RTU1 214 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 NPCDR1Q9BY65 106 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 MBD3L4A6NDZ8 208 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 MBD3L3A6NE82 208 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 MBD3L5A6NJ08 208 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 MBD3L2Q8NHZ7 208 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 RTBDNQ9BSG5 229 aaPredicted RBP13.57□□□□□ -0.24
USP42-207ENST00000521713 RNF126Q9BV68 326 aa13.57□□□□□ -0.24
USP42-207ENST00000521713 K7ENP7 123 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 PF4P02776 101 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 LGALS3P17931 250 aaKnown RBP13.56□□□□□ -0.24
USP42-207ENST00000521713 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 HIST3H2BBQ8N257 126 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 GTF3AQ92664 365 aaKnown RBP13.56□□□□□ -0.24
USP42-207ENST00000521713 IMMP2LQ96T52 175 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 C2orf88Q9BSF0 95 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 WNT10AQ9GZT5 417 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 A0A1B0GW64 132 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 ZNF324O75467 553 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms