RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 OR2H1Q9GZK4 316 aa4.86□□□□□ -1.63
NUDCD1-204ENST00000521439 POLR2J3Q9H1A7 115 aaKnown RBP4.86□□□□□ -1.63
NUDCD1-204ENST00000521439 RERGLQ9H628 205 aa4.86□□□□□ -1.63
NUDCD1-204ENST00000521439 FGF20Q9NP95 211 aaPredicted RBP4.86□□□□□ -1.63
NUDCD1-204ENST00000521439 TNFRSF19Q9NS68 423 aa4.86□□□□□ -1.63
NUDCD1-204ENST00000521439 PCTPQ9UKL6 214 aa4.86□□□□□ -1.63
NUDCD1-204ENST00000521439 IGLV3-10A0A075B6K4 115 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 IGKV6D-21A0A0A0MT36 114 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 A0A0B4J2A0 478 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 A6NDN8 102 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 CEACAM18A8MTB9 384 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 H3BQ15 152 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 GABRPO00591 440 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 CDC42EP2O14613 210 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 TAPBPO15533 448 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 ATP5LO75964 103 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 PFN1P07737 140 aaKnown RBP4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 LINC00032P0C843 101 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 CSRP1P21291 193 aaKnown RBP4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 FOXA1P55317 472 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 LIM2P55344 173 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 TPPP2P59282 170 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 LCN6P62502 163 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 PSG7Q13046 419 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 VGLL4Q14135 290 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 TP53I3Q53FA7 332 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 GLYATL3Q5SZD4 288 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 ZNF660Q6AZW8 331 aaPredicted RBP4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 CNIH2Q6PI25 160 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 FAM231DQ6ZW35 169 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 WDR31Q8NA23 367 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 OR51A4Q8NGJ6 313 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 OR2T27Q8NH04 317 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 NEIL3Q8TAT5 605 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 TSLPQ969D9 159 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 SLAMF6Q96DU3 332 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 ACY3Q96HD9 319 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 TMEM70Q9BUB7 260 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 SHPKQ9UHJ6 478 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 ENPP4Q9Y6X5 453 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 LOC285556D6RIA3 1793 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 SBF1O95248 1867 aa4.85□□□□□ -1.63
NUDCD1-204ENST00000521439 PLXNA1Q9UIW2 1896 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 IGLV8-61A0A075B6I0 122 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 DUXBA0A1W2PPF3 345 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ZNF850A8MQ14 1090 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ZNF705FA8MVS1 300 aaPredicted RBP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 SOD1P00441 154 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ZNF705DP0CH99 300 aaPredicted RBP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ZNF705BP0CI00 300 aaPredicted RBP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 CXCL12P48061 93 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 PFN3P60673 137 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 UBE2NP61088 152 aaKnown RBP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 PSG9Q00887 426 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 MEF2CQ06413 473 aaPredicted RBP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 MMDQ15546 238 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 CLEC12BQ2HXU8 276 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 TIGITQ495A1 244 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 TMEM255AQ5JRV8 349 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 C12orf73Q69YU5 71 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 UNQ5815/PRO19632Q6UWF5 114 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 TEX43Q6ZNM6 134 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 GOLT1AQ6ZVE7 132 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 LINC01561Q8N1V8 128 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 TMEM229BQ8NBD8 167 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 GPR26Q8NDV2 337 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 PPTC7Q8NI37 304 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 SLC37A2Q8TED4 501 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 UBE2E3Q969T4 207 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 DDIT4LQ96D03 193 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ZMYND19Q96E35 227 aaPredicted RBP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 LINC00477Q96M19 166 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 IP6K3Q96PC2 410 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 KIR2DL4Q99706 377 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 PRADC1Q9BSG0 188 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 C19orf24Q9BVV8 132 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 SPANXDQ9BXN6 97 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ULBP3Q9BZM4 244 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 TMEM133Q9H2Q1 129 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 PRTFDC1Q9NRG1 225 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 RBM22Q9NW64 420 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 SPRR3Q9UBC9 169 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 ASF1AQ9Y294 204 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 FIS1Q9Y3D6 152 aa4.84□□□□□ -1.63
NUDCD1-204ENST00000521439 XIRP1Q702N8 1843 aaKnown RBP4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 TRAV19A0A0A6YYK7 116 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 IGKV6-21A0A0C4DH24 114 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 A0A1B0GV50 99 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 C7orf77A4D0Y5 90 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 C7orf71A4D174 169 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 TMEM235A6NFC5 223 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 GGT3PA6NGU5 568 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 K7ENP7 123 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 HBE1P02100 147 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 HLA-DPB1P04440 258 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 MMP7P09237 267 aaPredicted RBP4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 TACSTD2P09758 323 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 H2BFMP0C1H6 154 aa4.83□□□□□ -1.64
NUDCD1-204ENST00000521439 SPINK8P0C7L1 97 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms