RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 SLURP1P55000 103 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 SRPXP78539 464 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 EXOSC2Q13868 293 aaKnown RBP12.5□□□□□ -0.41
TNPO1-212ENST00000520850 TMEM187Q14656 261 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 RBMS2Q15434 407 aaKnown RBP12.5□□□□□ -0.41
TNPO1-212ENST00000520850 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
TNPO1-212ENST00000520850 ZNF57Q68EA5 555 aaPredicted RBP12.5□□□□□ -0.41
TNPO1-212ENST00000520850 OR2C3Q8N628 320 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 OR1P1Q8NH06 330 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 SIGLEC8Q9NYZ4 499 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 DMRT1Q9Y5R6 373 aa12.5□□□□□ -0.41
TNPO1-212ENST00000520850 CENPXA8MT69 81 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 NDUFB8O95169 186 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 INPP1P49441 399 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 UBE2MP61081 183 aaKnown RBP12.49□□□□□ -0.41
TNPO1-212ENST00000520850 SUPT4H1P63272 117 aaKnown RBP12.49□□□□□ -0.41
TNPO1-212ENST00000520850 ERHP84090 104 aaKnown RBP12.49□□□□□ -0.41
TNPO1-212ENST00000520850 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 S100ZQ8WXG8 99 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 EEF1AKMT3Q96AZ1 226 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
TNPO1-212ENST00000520850 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
TNPO1-212ENST00000520850 A0A0B4J2A0 478 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 DUXBA0A1W2PPF3 345 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 REG1AP05451 166 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 IL7P13232 177 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 GPHB5Q86YW7 130 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 LRTM2Q8N967 370 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 SHPKQ9UHJ6 478 aa12.48□□□□□ -0.41
TNPO1-212ENST00000520850 BMPR1BO00238 502 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
TNPO1-212ENST00000520850 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 AKR1C4P17516 323 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 KRTAP10-11P60412 298 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 RPEL1Q2QD12 228 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 TMEM268Q5VZI3 342 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 Q6ZRM9 215 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 LGI3Q8N145 548 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 PLEKHA3Q9HB20 300 aa12.47□□□□□ -0.41
TNPO1-212ENST00000520850 AURKAIP1Q9NWT8 199 aaPredicted RBP12.47□□□□□ -0.41
TNPO1-212ENST00000520850 A0A0G2JRQ6 117 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 LGALS9O00182 355 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 NDUFB6O95139 128 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
TNPO1-212ENST00000520850 SPCS3P61009 180 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 SLC25A24Q6NUK1 477 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 C19orf35Q6ZS72 473 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 OR9G4Q8NGQ1 327 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 ZNF502Q8TBZ5 544 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 CCDC140Q96MF4 163 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 OR4C12Q96R67 309 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 PTTG2Q9NZH5 202 aa12.46□□□□□ -0.41
TNPO1-212ENST00000520850 IFNA17P01571 189 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 CLEC3BP05452 202 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
TNPO1-212ENST00000520850 MFAP2P55001 183 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 DEFA5Q01523 94 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 DCTN2Q13561 401 aaKnown RBP12.45□□□□□ -0.42
TNPO1-212ENST00000520850 IZUMO4Q1ZYL8 232 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 IL34Q6ZMJ4 242 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 CENPSQ8N2Z9 138 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
TNPO1-212ENST00000520850 GPR146Q96CH1 333 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 TXN2Q99757 166 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 GAR1Q9NY12 217 aaKnown RBP12.45□□□□□ -0.42
TNPO1-212ENST00000520850 PEMTQ9UBM1 199 aa12.45□□□□□ -0.42
TNPO1-212ENST00000520850 HLA-AP01891 365 aaKnown RBP12.44□□□□□ -0.42
TNPO1-212ENST00000520850 SLC25A6P12236 298 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 CCR6P51684 374 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 SUB1P53999 127 aaKnown RBP eCLIP12.44□□□□□ -0.42
TNPO1-212ENST00000520850 SYNJ2BPP57105 145 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 NMSQ5H8A3 153 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 SLC35G3Q8N808 338 aa12.44□□□□□ -0.42
TNPO1-212ENST00000520850 A0A1B0GU03 582 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 MFSD2BA6NFX1 497 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 K7EIM0 57 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 CORTO00230 105 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 PLA2G10O15496 165 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 SAP30O75446 220 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 SFT2D2O95562 160 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 IGLV1-51P01701 117 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 BTCP35070 178 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 ARL3P36405 182 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 SNCAP37840 140 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 FAM106AQ4KMX7 169 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 TMED4Q7Z7H5 227 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 SCARB1Q8WTV0 552 aa12.43□□□□□ -0.42
TNPO1-212ENST00000520850 BSCL2Q96G97 398 aaPredicted RBP12.43□□□□□ -0.42
TNPO1-212ENST00000520850 TMED3Q9Y3Q3 217 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms